Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02534 ATGCCAGAAATCGATATTGAGTGGCCCGCGAAGCGCGTCAGAGACACGTTTGTGAAGTTCTTCGAAGAGAAGAATCACGTCCATTGGAAGTCCAGCCCCGTCGTTCCTCTCAATGACCCTACTCTCCTCTTTGCTAACGCAGGGATGAACCAGTTCAAGCCAATTTTTTTGGGGACTGTTGATCCTAACACCGAGTTGAGCAAACTCACTCGTGCCTGCAATACCCAGAAGTGTATCCGAGCTGGTGGTAAGCACAATGATCTTGACGACGTAGGGAAAGACACTTACCATCACACCTTCTTTGAGATGCTAGGGAATTGGTCCTTCGGCGATTACTTCAAACAAGAAGCCATTAGCTGGGCATGGGAGTTACTCACCGAAGTTTATAAATTACCATCAGATCGTATTTATGTTACATATTTTGGTGGTGATGAGAAAACTGGTCTTGGCCCTGACAATGAAGCTAGAGATATATGGTTAAAGTTTTTGCCTCCTGGACGCGTTCTTCCTTTTAACAGTAAAGACAATTTTTGGGAGATGGGCGACACTGGTCCTTGTGGACCTTGCTCTGAGATACATTTTGACCGAGTTGGTGAACGTGATGCCGCATCTTTCGTAAATAATGACGATCCTACCGTCATTGAGATATGGAACCTTGTCTTCATACAGTTCAATAGGGAGGCTCACGGTTCTCTTAAATCCCTGCCTGCAAAGCATGTTGACACTGGCATGGGTTTTGAACGACTGACCTCTATACTGCAGACGAAGATGAGTAATTATGACACCACTGATGTCTTTGTTCCTATCTTAAATGCTATTCAGCAGGCAACTGGTGCTCGGCCATACTCCGGGAAAATTGGACCAGACGATGCCGATAAAGTTGACATGGCATACAGGGTTGTTGCAGATCACATCAGGACTCTGTCAATTGCCATTGCTGATGGATCTCAACCTGGTAATGTTGGTCGCGAGTATGTTCTGAGGCGTATACTCCGTCGAGCAGTTCGGTATGGAAGGGAAGTGCTAAAAGCTGAAGAGGGTTTTCTCAACGGGCTTGTAAATGTTGTGGCAAATGTGCTGGGTGATGTTTTCCCCGAGCTAAAGCAAAGTGAAGAGCGCATTAGGAAGGTGATTCAAGTGGAGGAGGAAAGTTTCAGCAGAAACTTATTTAAGGGCATCAGAAAATTTAACAAAGCGGTTGAACATGTACAGGGAAATATACTGAGCGGGGAGGCAACGTTTGAGTTGTCCGATACATTTGGGTTCCCATTAGATCTCACACAGCTTATGGCTGAAGAAAAGAAATTTTCTGTTGACATCGAAGGTTTTCATCGTGCTATGAAAGCCGCGAGGGAAAGATCAAAAACTGCTCCAAAGAAGAAAGTTTCGTCTCTGAAAAGCAACATGGAAACATTATCGATTCCTGCAGCCAAGAAAGCTGAAAACAAGATCGAGATAGCCCTACCTCAGGATCAAATGAGAAAAGCACAAAAGCATGTTGCTGAAGAAAACAAACGTAAAGCTGTAATGGTAACTACTGAGAAGGCAGACCTAGCTGTTTCAGACGCTAAATCTTTTTGCATATCTCACGTTGATGTTGGCCTAGATGTTGCAGCAGTTCGTGAGGCTGTAAAAAAAGTCATTGATCGGAAGGGATTGTCAGTGATGGTTTTTAGCACTGATGAATCTACAAACAAGGCTGTAGTTTGTGCTGGGGTGCCCGAGAAAGGAGATAAAGGTAAGCTGGATGTATCAGAGTGGCTGAGTAATGCTTTGGGGCCACTGAAAGGGAGATGTGGTAAAGGAAAAGGTGGTCTTGCAACGGGTCAGGGTACAGATGCATCACACATAAATGAGGCTATGCATCTTGCTGTGAAATTTGCATCGGTGAGATTGACTTAA 1902 0.4469 MPEIDIEWPAKRVRDTFVKFFEEKNHVHWKSSPVVPLNDPTLLFANAGMNQFKPIFLGTVDPNTELSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKQEAISWAWELLTEVYKLPSDRIYVTYFGGDEKTGLGPDNEARDIWLKFLPPGRVLPFNSKDNFWEMGDTGPCGPCSEIHFDRVGERDAASFVNNDDPTVIEIWNLVFIQFNREAHGSLKSLPAKHVDTGMGFERLTSILQTKMSNYDTTDVFVPILNAIQQATGARPYSGKIGPDDADKVDMAYRVVADHIRTLSIAIADGSQPGNVGREYVLRRILRRAVRYGREVLKAEEGFLNGLVNVVANVLGDVFPELKQSEERIRKVIQVEEESFSRNLFKGIRKFNKAVEHVQGNILSGEATFELSDTFGFPLDLTQLMAEEKKFSVDIEGFHRAMKAARERSKTAPKKKVSSLKSNMETLSIPAAKKAENKIEIALPQDQMRKAQKHVAEENKRKAVMVTTEKADLAVSDAKSFCISHVDVGLDVAAVREAVKKVIDRKGLSVMVFSTDESTNKAVVCAGVPEKGDKGKLDVSEWLSNALGPLKGRCGKGKGGLATGQGTDASHINEAMHLAVKFASVRLT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02534 633 CDD AlaRS_core 10 256 - -
Mepo2g02534 633 Gene3D Bira Bifunctional Protein; Domain 2 9 257 IPR045864 -
Mepo2g02534 633 SUPERFAMILY Class II aaRS and biotin synthetases 10 260 IPR045864 -
Mepo2g02534 633 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 8 511 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Mepo2g02534 633 FunFam Alanine--tRNA ligase, cytoplasmic 7 257 - -
Mepo2g02534 633 PRINTS Alanyl-tRNA synthetase signature 299 315 IPR002318 GO:0000166|GO:0005737
Mepo2g02534 633 PRINTS Alanyl-tRNA synthetase signature 86 97 IPR002318 GO:0000166|GO:0005737
Mepo2g02534 633 PRINTS Alanyl-tRNA synthetase signature 323 336 IPR002318 GO:0000166|GO:0005737
Mepo2g02534 633 PRINTS Alanyl-tRNA synthetase signature 214 225 IPR002318 GO:0000166|GO:0005737
Mepo2g02534 633 PRINTS Alanyl-tRNA synthetase signature 241 254 IPR002318 GO:0000166|GO:0005737
Mepo2g02534 633 Gene3D - 520 628 - -
Mepo2g02534 633 Pfam tRNA synthetases class II (A) 13 511 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Mepo2g02534 633 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 263 468 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Mepo2g02534 633 Pfam DHHA1 domain 493 626 IPR003156 GO:0003676
Mepo2g02534 633 Hamap Alanine--tRNA ligase [alaS]. 1 633 IPR023033 GO:0004813
Mepo2g02534 633 PANTHER ALANYL-TRNA SYNTHETASE 5 458 - -
Mepo2g02534 633 NCBIfam alanine--tRNA ligase 13 472 IPR002318 GO:0000166|GO:0005737
Mepo2g02534 633 FunFam Alanine--tRNA ligase 521 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02534 Mepo-Chr2 35012226 35018119 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02534 K01872 - gmx:100788271 783.097