Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo2g02521 | ATGGCTCAACCACCTCCCTCTGCTGCTGAAATAACGCCTACTTCCATCCCTAATCCACCTTCTTCTTCTTCAACTCCTTCATCATCACCGGTGCCATCAATCTCTTACGCCGCCCAACAAAATGTTAACGCTTCTGGGAATTCTCAGCAGCAGCAGCCGTCACATTCTGGGATGAACCCTAATTCAGCTGCTCAACCTCCATTTCATACTCACCCCCCACGTCCAGCTGCCCCTTCATTTTCATATAACTTTCCCCAAAGTGCACCGCCAGCTTTTACTGGCAACCAACATGGGCAATCGAACACTAACATGCCTGATTCCGCTACACAAGATTTTAGTAAAGTGTCATCTGCATCTAGTAAACATCCTGTTCCTGCTCCTACTTCTATATCCGCAATGCCGCCTCGCTCTGACCCTAACTATCGCCCAACTACTTTATGGATGCCAACTGCCCCAACTTTTCCCGTCCATCCTGTAATGCCCGGAACTCCTGGTACTCCTGGTCCCCCTGGATTAGCAAAACCTGTGATAATACCCTCCAATTCAGCTGCTCCATCTACAAGCACAGGTTTTCCCTCAGCCGCAGTACCGAGACAAAATATGTCAACTGCATCAGATCCTAATGCCTCACATAGAGGCTTACCCTATCCACCCATACCTTCCATGGTTGCTCCACCTCAGGGATATTGGTTACAGCCTCCACAGATGAGTGGTGTACTTAGGCCACCATTTCATCAATATCCTGCTGCTTTTCCTGGCCCCTTTCCATTTCCAGCACGTGGTGGTGCACTCCCTGCTGTTCCAGTACCTGATTCTCAACCTCCTGGTGTTACTCCTGTTGGTGCTGCCAGCATTTCTGCACCTTCTGCTTCCAGTCATCTGCTGAGGGGAACATCTGGTGTGCAGACAGAAGTAATTTCAGCACATACTGATGACAAGCACAAATTAAACGCCACTGTGACACAGAATGAGGATGCTGCTAATGATCAGCTAGATGCTTGGACTGCCCACAAGACTGAAGCAGGGATTGTATACTATTATAATGCTTTGACAGGGCAATCAACATATGATAAACCTGCTGGTTTTAAAGGGGAGGCTCACCAAGTTTCTGTGCAGCCCACTCCAGTTTCAATGGTAGATTTGCCTGGTACTGATTGGCAGTTGGTCTCAACTAGTGATGGGAAAAAATATTACTATAACAATCGAACCAAGACAAGCTGCTGGCAAATCCCCAATGAGGTGGTGGAATTGAAAAAAAAGCAGGACAGTGATGTTACAAAAGATCATCCGACGCCCGTTCCAAATACTAATGTATTGTCTGAGAGAGGGTCTGGAATGGTTACTCTGAATGCTCCTGCTATTACCACTGGTGGTCGTGATGCTGTAGCTTCTAAACCCTCTATCGTACAGAGCTCACCATCGGCACTGGATTTGATCAAGAAGAAGTTGCAGGAATCAGGAGCACCTGTTACATCCTCTTCTATTCCTACTCCATCAGTGCAACCAGGATCTGAATCAAATGGTTCAAAAGCAACCGAATCTACAGCTAAGAGCCTGCAAAATGATAATAGCAAAGACAAACAAAAAGATGCTAATGGCGATGCTAATGTCTCTGATACATCTTCAGATTCAGAAGACGAGGATAGCGGGCCTTCAAAGGAGGAGTGCATAAATCAATTTAAGGAGATGCTTAAGGAGCGTGGCGTGGCACCATTCTCAAAATGGGAGAAAGAACTACCAAAGATAGTATTTGATCCTCGTTTTAAGGCTATACCTAGCTATTCTGCTAGGAGATCCTTGTTTGAACATTATGTTAAAAATCGTGCGGAAGAAGAACGCAAGGAAAAACGTGCTGCACAAAAGGCTGCAATTGAGGGGTTTAAGCAGCTACTAGACGAAGCCTCAGAGGATATTGATGACAAGACTGATTATCACACTTTTCGAAAGAAATGGGGAAATGATCCACGGTTTGAGGCATTGGACCGCAAGGAACGGGAACACCTTCTGAACGAAAGAGTGCTTCCTTTAAAGAAAGCCACTGAAGAAAAAGCTCAAGCAATGCGTGATGCTGCTGCTGACAGTTTTAAGTCAATGCTTAAAGAACAAGGAGATATAACTTTCAACTCTCGTTGGTCCAGGGTTAAAGAGAGTTTAAGAGATGACCCGAGATATAAATCTGTGAAACATGAGGATAGGGAATTATTGTTCAATGAGTATATTTCCGAGTTGAAAGCTGTTGAGCATGCAGCAGAACGAGAGACCAGAGCTAAAAGAGAGGAGCAGGACAAGCTGCGGGAGAGGGAGCGGGAGCTGCGTAAAAGGAAGGAAAGAGAAGAACATGAAATGGAAAGGGTCCGACTAAAAATTCGTAGGAAGGAGGCAGTTACTTCTTTTCAAGCTTTACTTGTGGAGAGAATCAAAGACCCTATGGCATCATGGACAGAATCGAAGCCTAAACTAGAAAAAGATCCTCAAGGGCGTGCAACCAATTCTGATCTTGATTTAGCTGACATGGAAAAACTCTTCCGGGATCATGTAAAGATGCTTCAGGAACGTCGTGCTCGCGATTTTAGAGCTCTTCTAGCTGAATTCTTGACTTCTGAAGCCGCGTCTCAGGAAACTGACGATGGGAAAACAGTGCTTAATTCATGGTCTACAGCAAAGCGTCTTATAAAATCTGATCCAAGATATAACAAGGTTCCAAGTGAAGATAGAGAAGCCTTGTGGCGCCGGTATGCAGAGGATATGATGCGGCGGCAAAAATCATCTCATGATTCAAAGGAAGAAAAACATACAGATGCCAGAGGTAGAAAGTCTCTAGAGTCTTCCAAACATCCATTGGAATCAGGGAGATCGCATGAGAGAAGATAA | 2871 | 0.4521 | MAQPPPSAAEITPTSIPNPPSSSSTPSSSPVPSISYAAQQNVNASGNSQQQQPSHSGMNPNSAAQPPFHTHPPRPAAPSFSYNFPQSAPPAFTGNQHGQSNTNMPDSATQDFSKVSSASSKHPVPAPTSISAMPPRSDPNYRPTTLWMPTAPTFPVHPVMPGTPGTPGPPGLAKPVIIPSNSAAPSTSTGFPSAAVPRQNMSTASDPNASHRGLPYPPIPSMVAPPQGYWLQPPQMSGVLRPPFHQYPAAFPGPFPFPARGGALPAVPVPDSQPPGVTPVGAASISAPSASSHLLRGTSGVQTEVISAHTDDKHKLNATVTQNEDAANDQLDAWTAHKTEAGIVYYYNALTGQSTYDKPAGFKGEAHQVSVQPTPVSMVDLPGTDWQLVSTSDGKKYYYNNRTKTSCWQIPNEVVELKKKQDSDVTKDHPTPVPNTNVLSERGSGMVTLNAPAITTGGRDAVASKPSIVQSSPSALDLIKKKLQESGAPVTSSSIPTPSVQPGSESNGSKATESTAKSLQNDNSKDKQKDANGDANVSDTSSDSEDEDSGPSKEECINQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHYVKNRAEEERKEKRAAQKAAIEGFKQLLDEASEDIDDKTDYHTFRKKWGNDPRFEALDRKEREHLLNERVLPLKKATEEKAQAMRDAAADSFKSMLKEQGDITFNSRWSRVKESLRDDPRYKSVKHEDRELLFNEYISELKAVEHAAERETRAKREEQDKLRERERELRKRKEREEHEMERVRLKIRRKEAVTSFQALLVERIKDPMASWTESKPKLEKDPQGRATNSDLDLADMEKLFRDHVKMLQERRARDFRALLAEFLTSEAASQETDDGKTVLNSWSTAKRLIKSDPRYNKVPSEDREALWRRYAEDMMRRQKSSHDSKEEKHTDARGRKSLESSKHPLESGRSHERR | 956 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo2g02521 | 956 | Gene3D | - | 329 | 370 | - | - | |
| Mepo2g02521 | 956 | ProSiteProfiles | FF domain profile. | 620 | 675 | IPR002713 | - | |
| Mepo2g02521 | 956 | Gene3D | FF domain | 619 | 676 | IPR036517 | - | |
| Mepo2g02521 | 956 | ProSitePatterns | WW/rsp5/WWP domain signature. | 386 | 411 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | FunFam | Pre-mRNA-processing protein 40C | 788 | 848 | - | - | |
| Mepo2g02521 | 956 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR 1 | 46 | 950 | IPR045148 | GO:0003712|GO:0070063 | |
| Mepo2g02521 | 956 | MobiDBLite | consensus disorder prediction | 486 | 519 | - | - | |
| Mepo2g02521 | 956 | CDD | WW | 334 | 359 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | Gene3D | FF domain | 849 | 915 | IPR036517 | - | |
| Mepo2g02521 | 956 | Gene3D | FF domain | 788 | 848 | IPR036517 | - | |
| Mepo2g02521 | 956 | MobiDBLite | consensus disorder prediction | 916 | 956 | - | - | |
| Mepo2g02521 | 956 | SUPERFAMILY | WW domain | 385 | 417 | IPR036020 | GO:0005515 | |
| Mepo2g02521 | 956 | Coils | Coil | 743 | 795 | - | - | |
| Mepo2g02521 | 956 | Pfam | FF domain | 691 | 739 | IPR002713 | - | |
| Mepo2g02521 | 956 | Pfam | FF domain | 623 | 671 | IPR002713 | - | |
| Mepo2g02521 | 956 | Pfam | FF domain | 794 | 845 | IPR002713 | - | |
| Mepo2g02521 | 956 | Pfam | FF domain | 557 | 604 | IPR002713 | - | |
| Mepo2g02521 | 956 | Pfam | FF domain | 855 | 912 | IPR002713 | - | |
| Mepo2g02521 | 956 | Gene3D | FF domain | 551 | 618 | IPR036517 | - | |
| Mepo2g02521 | 956 | SUPERFAMILY | FF domain | 784 | 852 | IPR036517 | - | |
| Mepo2g02521 | 956 | Gene3D | FF domain | 677 | 753 | IPR036517 | - | |
| Mepo2g02521 | 956 | MobiDBLite | consensus disorder prediction | 27 | 65 | - | - | |
| Mepo2g02521 | 956 | FunFam | Pre-mRNA-processing protein 40C isoform C | 616 | 679 | - | - | |
| Mepo2g02521 | 956 | SUPERFAMILY | FF domain | 548 | 613 | IPR036517 | - | |
| Mepo2g02521 | 956 | CDD | WW | 384 | 413 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | ProSitePatterns | WW/rsp5/WWP domain signature. | 334 | 359 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | ProSiteProfiles | FF domain profile. | 553 | 607 | IPR002713 | - | |
| Mepo2g02521 | 956 | Pfam | WW domain | 333 | 359 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | SUPERFAMILY | FF domain | 612 | 681 | IPR036517 | - | |
| Mepo2g02521 | 956 | FunFam | pre-mRNA-processing protein 40C isoform X1 | 538 | 615 | - | - | |
| Mepo2g02521 | 956 | MobiDBLite | consensus disorder prediction | 486 | 556 | - | - | |
| Mepo2g02521 | 956 | ProSiteProfiles | FF domain profile. | 791 | 848 | IPR002713 | - | |
| Mepo2g02521 | 956 | FunFam | Pre-mRNA-processing protein 40C | 850 | 915 | - | - | |
| Mepo2g02521 | 956 | ProSiteProfiles | FF domain profile. | 688 | 742 | IPR002713 | - | |
| Mepo2g02521 | 956 | Gene3D | - | 371 | 431 | - | - | |
| Mepo2g02521 | 956 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 328 | 361 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | MobiDBLite | consensus disorder prediction | 1 | 144 | - | - | |
| Mepo2g02521 | 956 | SUPERFAMILY | WW domain | 333 | 364 | IPR036020 | GO:0005515 | |
| Mepo2g02521 | 956 | SUPERFAMILY | FF domain | 843 | 921 | IPR036517 | - | |
| Mepo2g02521 | 956 | FunFam | Pre-mRNA-processing protein 40C | 680 | 754 | - | - | |
| Mepo2g02521 | 956 | SMART | FF_2 | 620 | 675 | IPR002713 | - | |
| Mepo2g02521 | 956 | SMART | FF_2 | 850 | 915 | IPR002713 | - | |
| Mepo2g02521 | 956 | SMART | FF_2 | 791 | 848 | IPR002713 | - | |
| Mepo2g02521 | 956 | SMART | FF_2 | 688 | 742 | IPR002713 | - | |
| Mepo2g02521 | 956 | SMART | FF_2 | 553 | 607 | IPR002713 | - | |
| Mepo2g02521 | 956 | SUPERFAMILY | FF domain | 681 | 745 | IPR036517 | - | |
| Mepo2g02521 | 956 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 386 | 413 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | SMART | ww_5 | 329 | 361 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | SMART | ww_5 | 381 | 413 | IPR001202 | GO:0005515 | |
| Mepo2g02521 | 956 | MobiDBLite | consensus disorder prediction | 419 | 441 | - | - | |
| Mepo2g02521 | 956 | MobiDBLite | consensus disorder prediction | 749 | 783 | - | - | |
| Mepo2g02521 | 956 | MobiDBLite | consensus disorder prediction | 80 | 126 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo2g02521 | Mepo-Chr2 | 34908383 | 34921587 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo2g02521 | K12824 | - | gmx:100815386 | 1331.24 |