Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02506 ATGGCAAGCATTCCTGGAAAATTTGCTCCTTCTAATGGGTCTATCTATGTCTGCAACTTGCCTTATGGGACCGACGATAATATGTTGGCTGAATATTTTGGCACTATTGGAGTAATAAAGAAAGACAAACGTACTGGGAAACCTAAAATATGGTTATATCATGACAAAGAGACTAATGAACCAAAGGGAGATGCTACTGTGACATACGAGGATCCGCATGCTGCCGTGGCTGCTGTTGAGTGGTTTAACAACAAAGATTTTCATGGCAATACAATTGGTGTTTATATAGCGGAGTCAAAAAACAAGGATGACCAAACATATACTGCAATAGCAGACCCGGTTGTTGCTGGTACTGATGTCGGACCAGAGGAAACTGAAAGTGATGTCGATGGTGTTAATGGAAGAGGTAGAGGTCAAATTGATGCTTCCAGCAAACCATGGCAACAAGAGGGCGATTGGATGTGTCCGAATACAAGTTGCTCGAATGTGAATTTTGCTTTCCGGGGTGCGTGTAATCGCTGTGGAAGTGCACGCCCTGCTGGTGCTTCTGGCGTTGCAGGAGGAGGTGGCCGTGGCAGGGGACGTTCTGGGCCAGATGCAGGAGGGGGTATTGGCCGTCCAGCTGGTGCAACTGCAGGGCTATTTGGTCCCAATGACTGGCCTTGTCCAATGTGTGGCAATATCAATTGGGCAAAGCGGTTAAAATGCAATATTTGCAATACAAACAAGCCTGGGCACAACGAGGGTGGTGTAAGAGGAGGGCGAGCTGGAGGTTACAAAGAACTTGATGAAGAGGAAATTGAAGAAACTAAACGTCGTAGGCGGCAAGCTGAAGACGATGGTGAGCTGTATGATGAATTTGGAAACCTTAAGAAGAAATTCCGTGCCAAAACACAGCAATCTGAAACTGCACGAGTGCTTCCTGGTTCAGGGCGTGCTGGTTGGGAGGTTGAGGATCTAGGGATTGACAGAGATGCTACAGAAAAAAGCAGAGACAGAGGAAGAGAGTCAAGGGACCGTTATGATGGAGAGCAGAGAAACAGAGAGCAAAACGAGGAGAGGCAAAGCAGTCGAAATAGAGAGAGGGACAGGGGAAGAGATCGAGACAGGGATTATGGACGAGAACGGGACCGAAGTAGACACCGATATTAA 1152 0.4714 MASIPGKFAPSNGSIYVCNLPYGTDDNMLAEYFGTIGVIKKDKRTGKPKIWLYHDKETNEPKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVYIAESKNKDDQTYTAIADPVVAGTDVGPEETESDVDGVNGRGRGQIDASSKPWQQEGDWMCPNTSCSNVNFAFRGACNRCGSARPAGASGVAGGGGRGRGRSGPDAGGGIGRPAGATAGLFGPNDWPCPMCGNINWAKRLKCNICNTNKPGHNEGGVRGGRAGGYKELDEEEIEETKRRRRQAEDDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLGIDRDATEKSRDRGRESRDRYDGEQRNREQNEERQSSRNRERDRGRDRDRDYGRERDRSRHRY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02506 383 SUPERFAMILY Ran binding protein zinc finger-like 144 181 IPR036443 -
Mepo2g02506 383 ProSitePatterns Zinc finger RanBP2-type signature. 153 174 IPR001876 -
Mepo2g02506 383 Pfam Zn-finger in Ran binding protein and others 150 179 IPR001876 -
Mepo2g02506 383 Pfam Zn-finger in Ran binding protein and others 219 245 IPR001876 -
Mepo2g02506 383 MobiDBLite consensus disorder prediction 182 205 - -
Mepo2g02506 383 FunFam HIV Tat-specific factor 1 12 96 - -
Mepo2g02506 383 ProSitePatterns Zinc finger RanBP2-type signature. 220 239 IPR001876 -
Mepo2g02506 383 MobiDBLite consensus disorder prediction 295 383 - -
Mepo2g02506 383 SUPERFAMILY RNA-binding domain, RBD 10 102 IPR035979 GO:0003676
Mepo2g02506 383 MobiDBLite consensus disorder prediction 245 283 - -
Mepo2g02506 383 CDD RRM_SARFH 15 97 - -
Mepo2g02506 383 Gene3D - 12 95 IPR012677 -
Mepo2g02506 383 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 92 IPR000504 GO:0003723
Mepo2g02506 383 MobiDBLite consensus disorder prediction 257 283 - -
Mepo2g02506 383 Gene3D - 215 246 - -
Mepo2g02506 383 Gene3D - 145 182 - -
Mepo2g02506 383 MobiDBLite consensus disorder prediction 317 383 - -
Mepo2g02506 383 FunFam Zinc finger Ran-binding domain-containing protein 2 211 245 - -
Mepo2g02506 383 Coils Coil 260 280 - -
Mepo2g02506 383 ProSiteProfiles Zinc finger RanBP2 type profile. 216 245 IPR001876 -
Mepo2g02506 383 SUPERFAMILY Ran binding protein zinc finger-like 211 246 IPR036443 -
Mepo2g02506 383 FunFam TATA-binding protein-associated factor 2N isoform X1 147 181 - -
Mepo2g02506 383 PANTHER ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED 123 378 - -
Mepo2g02506 383 SMART zf_4 218 242 IPR001876 -
Mepo2g02506 383 SMART zf_4 151 177 IPR001876 -
Mepo2g02506 383 ProSiteProfiles Zinc finger RanBP2 type profile. 149 180 IPR001876 -
Mepo2g02506 383 SMART rrm1_1 14 95 IPR000504 GO:0003723
Mepo2g02506 383 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 99 IPR000504 GO:0003723
Mepo2g02506 383 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02506 Mepo-Chr2 34804524 34810444 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02506 - - aip:107628735 521.546