Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02430 ATGGATGTTAACAACCTCTTCTGCAACCACCGTTCTCTCCGATTAACCTCTCCTCTCTCTCTTTCTTCTCGTACACACTTCCTCGGTTGCAATCACAGTCTCAAACCTCCTACATCTTCATCTTCAGCTTCAGCTTCATCGCTTCGCTCTCGTAATAAACGGAGCAATAGGTTAGGACTTCTTCGTCTTCATTCTCCGCGGTTTGTATTCAAGGCTGCTTTAAACTCTCAGCTTATTGTTGTTGTTGTCGTTGTTACTTTATCTGCTGTTTCTTGGATTCATTTCACTCTCAACAGTAAGAAAAAGAAGAATCTCAACCAGGGACATGCAAAATATGCATTATCACCACAAGGAAGTAACGTTGGGAACCAGGTCATTGATAGCCAGATTCTTGGATTTCCAGAATTTCAAAGGGATAACTCACTGAACGAAATTGGGAAGTTAAATGACCTCAACGGAAAGGAAAACCATGTTTTTGAGGACCAAGAGGTCCACCTTCAATTTTTGCAATCTTCTATGGTGCAGGAAACAACCATGAAGACTCGGACATTAGATTCATCATCATCTGTTCTTGACTCTAGTGTCAATGGTAACTCTGTTCTTGACTCTAGTGTTAATGGTAACAGTTCCTTTAGTGTCAATGGTAACAGTTCTGAGGTATTAGAGGAGCCTTTTTTGTCTGTGACTTTCCAATCAAATTCATTGGCATCTATAGCTTTTGCTGAGGAAATGACTTTACAAGTGGAAGAAAGTCAAGATGTTGCTGACTCTGCTCTTGAGTTGCCTTTGAGTGAGGTCAAACCTGAGCATAACACTTCTTCTGTTGGTTTAGACAAAGCACTTGATACAATCAATGGCCATACTAAAGAAAAAATTGATCTTCATGCCATCAAAAGCAATGTCATTTTTGGTGAATCTGTTAGGGAAGGGCTGTACATGTTTTATGATGACAATAATTTGGCATCTGAATCCATGACACCCCTGAGTAGTATCAAGTCATTATCTCCCAGTACTTCTTTTGTGAATAGCACAGAACTGTCATCAGCTATAAGAAATATCAGCCTGGATGGATTAGGATTATCTGCAGATATTTCTCTACAAAATGCAGAGTACGTTGAAGGAGCAGCTAAAATTTCCAGTCCCAAGGAAGGCTATCCTCCACAACATACAAGTAAAAAATTGAGGAAATCCAGCAGATATGTGAGAGACATGGAAAGGAACTATATGGATCACAATAATAACAATGTTTTGCCCCAGAGTTCCCACATCAGGGTGCATGTTGATCAGAGAAATGATCAAATCAGGGTCCACGATGGTCTGAAAGTTGATCCTTCAAAGCATCTAAGCAAGTATAATAACTTGCTAAAAGCTGGGAGGTTATGTGAATGTGTAGAATTGCTTAAAGATATGGAAATGAAGGGTTTACTAGATATGACTAAGGTTTATCATGCCAAGTTTTTCAACATCTGCAAGAAACAAAAAGCCGTAAATGAAGCCTTTGATTATGTTAGGCTTATTCCAAATCCAACATTGAGTACATTTAATATGCTTATGTCAGTGTGTGCAAGCTCCCAAGATTCAGAAGGGGCTTTCCAAGTTATTCAGCTTCTTAAGGATGCTCGACTAGATCCTGATTGCAAACTTTATACCACTCTAATATCAACTTGTGGCAAGAGTGGGAAAGTTGATCTAATGTTTGAAGTGTTTCACAAGATGGTTAATTCTGGAGTGGAACCTAACGTTCATACCTACGGGGCACTTATAGATGGTTGTGCTAGAGCTGGTCAAGTAGCTAAAGCATTTGGTGCTTATGGGATAATGAGGTCAAAGAATGTGAAGGCAGATCGTGTTGTTTTCAATGCACTTATAGCTGCATGTGCACAGTCGGGAGCAATGGCTCGTGCCTTTGATGTGATAGCAGAAATGGAAGCTGAAATACAGCCTATAGTGCCAGACCACGTAACTTTTGGCACATTGATGAAGGCATGTGCAAAGGCTGGTCAGGTTGAACGAGCACGTGAAGTGTATAAGATGATAGAGCAATATAATATAAAGGGATCTTCAGAAGTTTACACAATTGCAATTAATTCTTGCAGTCAAACTGGAGATTGGGAATTTGCACGTAGTGTATACGATGACATGACCCGGAAAGGGGTGCTCCCTGATGAGATGTTTATGAGTGCACTAATAGATGTTGCTGGACATGCTAAAAAGCTGGAGGCTGCCTTTGATATACTACAACAAGCCCGGAAAGAAGGAGTACAGATTGGAATAATGACATATAGCTCATTGATGGGCGCCTGTAGCAAGGCAAAAAATTGGCAGAGAGCATTGGAGCTATACGAATATCTTAAATCTCTTAAATTGGTGCAAACAGTTTCAACTGTTAATGCTTTGCTCACTGCACTTTGTGATGGAGATCAATTTCAGAAGGCTTTGGAGGTTTTATCTGAAATGAAAGGATTAGGATTGTGCCCAAACAGTATCACATTCTCAATACTTATAGTGGCAAGTGAGAAGAAGGATGATATGGAAGCCGCTCAAATGCTCCTTTCTCAAGCCAAAAAGGATGGTGCAGCACCTACTCTCATCATGTGTCGATGCATAATTGGAATGTGCCTGCGGAGGTTTGAGAAGGCTTGTCTTGTTGGTGAAACTGTTTTATCTTTTGACTCAGGGCAGCCACAAGTTAATAATGAATGGACATCACTGGCTTTAATGGTGTATCGCGAAACAATAGGAGCTGGTGAAAAGCCTACAAGTCAAATATTGTCACAAGTTCTGGGATGCTTGAAATTCCCTTATGATACATGTGTGAAAAATAGACTTGTTGAGAACCTGGGAGTAACTGCTGAGAGCTCAAAAACTTCAAACCTCTGTTCGTTGATAGATGGGTTTGGCGAATATGATCCTCGCGCTTTTTCAATACTTGAGGAAGCTGCTTCATATGGAGTTGTTCCATCTGTATCACTTAAAATGAATCCTATTGTTATCGATGCTAAAGAATTGGATGCTTTTACTGCTGAGGTATACCTCTTAACTATTTTGAAAGGTCTCAAGCATCGACTAGCTGCAGGTGCAAAACTACCCAATATAATCATTTTACTGCCTGTAGAAGAAACAAAACTTTTGTCTCCAGAAGGGGAAAAGATTATTATACTTGCAGAAAGAGGTGGCCAAGCAGTTGCAGCGATGTTTAGAAGGCTTCATATTCCTTACCAGGGTAGTGAATCAAATGGGAAACTTAGAATAAATAGTCTGGGCTTGATAAAATGGTATCAGCCAAAGCTTGCATCTCCATTCGGCGGTTTCCAAGGTGATTGGAGCTCATCCCAATTACGACTCGGCAAAAATATTAGCAATCAGCAACGAAACATTCGAACTGGAAATCTATCTCTGGACTAA 3405 0.4023 MDVNNLFCNHRSLRLTSPLSLSSRTHFLGCNHSLKPPTSSSSASASSLRSRNKRSNRLGLLRLHSPRFVFKAALNSQLIVVVVVVTLSAVSWIHFTLNSKKKKNLNQGHAKYALSPQGSNVGNQVIDSQILGFPEFQRDNSLNEIGKLNDLNGKENHVFEDQEVHLQFLQSSMVQETTMKTRTLDSSSSVLDSSVNGNSVLDSSVNGNSSFSVNGNSSEVLEEPFLSVTFQSNSLASIAFAEEMTLQVEESQDVADSALELPLSEVKPEHNTSSVGLDKALDTINGHTKEKIDLHAIKSNVIFGESVREGLYMFYDDNNLASESMTPLSSIKSLSPSTSFVNSTELSSAIRNISLDGLGLSADISLQNAEYVEGAAKISSPKEGYPPQHTSKKLRKSSRYVRDMERNYMDHNNNNVLPQSSHIRVHVDQRNDQIRVHDGLKVDPSKHLSKYNNLLKAGRLCECVELLKDMEMKGLLDMTKVYHAKFFNICKKQKAVNEAFDYVRLIPNPTLSTFNMLMSVCASSQDSEGAFQVIQLLKDARLDPDCKLYTTLISTCGKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAACAQSGAMARAFDVIAEMEAEIQPIVPDHVTFGTLMKACAKAGQVERAREVYKMIEQYNIKGSSEVYTIAINSCSQTGDWEFARSVYDDMTRKGVLPDEMFMSALIDVAGHAKKLEAAFDILQQARKEGVQIGIMTYSSLMGACSKAKNWQRALELYEYLKSLKLVQTVSTVNALLTALCDGDQFQKALEVLSEMKGLGLCPNSITFSILIVASEKKDDMEAAQMLLSQAKKDGAAPTLIMCRCIIGMCLRRFEKACLVGETVLSFDSGQPQVNNEWTSLALMVYRETIGAGEKPTSQILSQVLGCLKFPYDTCVKNRLVENLGVTAESSKTSNLCSLIDGFGEYDPRAFSILEEAASYGVVPSVSLKMNPIVIDAKELDAFTAEVYLLTILKGLKHRLAAGAKLPNIIILLPVEETKLLSPEGEKIIILAERGGQAVAAMFRRLHIPYQGSESNGKLRINSLGLIKWYQPKLASPFGGFQGDWSSSQLRLGKNISNQQRNIRTGNLSLD 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02430 1134 Coils Coil 837 857 - -
Mepo2g02430 1134 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 14 1133 - -
Mepo2g02430 1134 FunFam Pentatricopeptide repeat-containing protein MRL1 chloroplastic 737 884 - -
Mepo2g02430 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 652 686 IPR002885 -
Mepo2g02430 1134 Gene3D Tetratricopeptide repeat domain 445 645 IPR011990 GO:0005515
Mepo2g02430 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 687 721 IPR002885 -
Mepo2g02430 1134 Gene3D Tetratricopeptide repeat domain 646 717 IPR011990 GO:0005515
Mepo2g02430 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 757 791 IPR002885 -
Mepo2g02430 1134 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X1 645 736 - -
Mepo2g02430 1134 NCBIfam pentatricopeptide repeat 760 790 IPR002885 -
Mepo2g02430 1134 NCBIfam pentatricopeptide repeat 654 685 IPR002885 -
Mepo2g02430 1134 NCBIfam pentatricopeptide repeat 582 615 IPR002885 -
Mepo2g02430 1134 NCBIfam pentatricopeptide repeat 690 723 IPR002885 -
Mepo2g02430 1134 NCBIfam pentatricopeptide repeat 513 546 IPR002885 -
Mepo2g02430 1134 NCBIfam pentatricopeptide repeat 548 581 IPR002885 -
Mepo2g02430 1134 NCBIfam pentatricopeptide repeat 795 827 IPR002885 -
Mepo2g02430 1134 Pfam PPR repeat family 545 593 IPR002885 -
Mepo2g02430 1134 Pfam Pentatricopeptide repeat domain 815 873 IPR002885 -
Mepo2g02430 1134 Pfam Pentatricopeptide repeat domain 607 644 IPR002885 -
Mepo2g02430 1134 Pfam Pentacotripeptide-repeat region of PRORP 660 802 IPR033443 -
Mepo2g02430 1134 Gene3D Tetratricopeptide repeat domain 730 958 IPR011990 GO:0005515
Mepo2g02430 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Mepo2g02430 1134 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic 459 590 - -
Mepo2g02430 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 792 826 IPR002885 -
Mepo2g02430 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 615 645 IPR002885 -
Mepo2g02430 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 580 614 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02430 549 874 Glycosyltransferase AT1G05670 24.159 4.13e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02430 - - gmx:100814164 1563.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02430 2 34061868 34073944 Mepo2g02430 2 34061868 34073944 ECH