Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02350 ATGAAAAGCATCACATGTTATTTGCTACTATTGTGCATGTTATTTACAACGTGTTCTTCATTAAATAATGATCTTGATGCGTTGCTAAAGCTAAAAAAATCAATGAAAGGAGAGAAAGCCAAAGATGATGCACTCAATGACTGGAAATTTTCAACTTCTGCTTCAGCTCACTGTTCATTTTCCGGTGTAAAATGCGACGAAGATCAACGAGTGATTGCTCTGAACGTGACGCAAGTTCCACTCTTCGGACACCTTTCCAAGGAGATTGGAGAGTTGAACATGCTCGAAAGCCTTGTCATCACTATGGACAATCTCACCGGCGAGCTTCCAACTGAGCTATCCAAACTTACTTCTCTTAGAATCCTCAACATCTCTCACAACCTCTTCTCTGGCGATTTCCCCGGCAACATCACTTTCGGAATGAAGAAACTTGAGGCTCTAGATGCTTATGACAATAGCTTCAAAGGTCCTCTTCCAGAGGAAATCGTTAGCCTGATGGAACTCAAGCACTTAAATCTTGCTGGAAACTTTTTCACAGGGACAATACCGGAGAGTTACTCGGAGTTTCAGAAGTTGGAGATTTTAAGGTTGAACTATAACAGTTTAACAGGCAAGATTCCTAAGAGTTTGTCGAAGTTAAAGACGCTGAAGGAACTCCGTTTAGGTTACGATAATGCTTACTCCGGTGGAATTCCACCGGAGTTCGGTTCAATCAAATCTCTCCGATATCTGGACATTTCTAACTCTAACCTCACCGGAGAAATTCCACCGAGTCTTGGAAATTTAGAAAACCTCGACTACTTGTTTTTGCAAATGAACTACCTCACCGGAAAAATTCCACCCGAACTCTCTTCAATGCGAAGTCTCACGACGTTGGATCTCTCTATCAACGGACTCTCAGGGGAGATTCCAGAAACCTTCTCAAAGCTGAAAAATCTCACTCTCATCAATTTCTTCCAGAACAAGCTTTGCGGTTCAATTCCAGCCTTCGTCGGCGATCTTCCTAACCTCGAATCGCTTCAGGTTTGGGACAACAATTTCTCTTTTGTATTGCCGCAGAATCTCGGTTCAAACGGGAAGTTCATATACTTTGACGTTACGAAGAATCACCTCACCGGATTGATCCCACCGGAGTTATGCAAATCGAAGAAGTTGAAAACGTTTATCGTTACTGACAACTTCCTCAGTGGTCCAATACCTAACGGAATCGGCGCGTGTAAGTCACTTGAAAAAATCAGAGTCGCTAATAACTACTTGGACGGTATGGTCCCATTGGGGATTTTTCAGTTGCCTTCTGTAACGATAATGGAGCTTGAAAATAACCGTTTTAACGGCCAACTACCATCCGAGATTTCTGGCAATTCTCTCGGGATTCTCACTCTTTCGAACAATTTATTTACCGGGAGGATTCCGGCGTCCATGAAGAATCTCCAATCACTGCAGACGCTGTTACTCGACGCCAATCAGTTTGTCGGAGAAATTCCGGCAGAGGTCTTTGCTTTACCGGTGTTGACTAGAATCAACATAAGTGGCAACAATCTCACCGGTGGAATTCCAATGACGGTTACTCAATGTAGTACATTGACAGCCGTTGACTTCAGCCGAAACATGCTTACCGGTGAGGTTCCTAAAGGGATGAAGAATCTGAAGGTGCTAAGCATTTTGAATGTTTCGCATAATAGCATATCAGGGCAAATCCCCGATGATATTAGATTCATGATGAGTCTAACGACGCTGGATTTATCTTACAACAATTTCACCGGAATTGTCCCCAGCGATGGTCAGTTTTTGGTCTTCAATGACCGGTCATTTGCTGGAAACCCTAGCCTATGTTTTCCACTCCAAACAACATGTTCTTCATTGCTCTATCCTTCGAGAAAAAGACATGCAAAGGAGAAAGCCATCGTCATAGCAATTGTCTTTGCCATAGTGGTTTTGATGGTAATTGTAACGTTGCACATGATGAGGAAGAGGAAGCGTCACATGGCAAAAGCATGGAAGCTAACAGCGTTTTAG 2016 0.4301 MKSITCYLLLLCMLFTTCSSLNNDLDALLKLKKSMKGEKAKDDALNDWKFSTSASAHCSFSGVKCDEDQRVIALNVTQVPLFGHLSKEIGELNMLESLVITMDNLTGELPTELSKLTSLRILNISHNLFSGDFPGNITFGMKKLEALDAYDNSFKGPLPEEIVSLMELKHLNLAGNFFTGTIPESYSEFQKLEILRLNYNSLTGKIPKSLSKLKTLKELRLGYDNAYSGGIPPEFGSIKSLRYLDISNSNLTGEIPPSLGNLENLDYLFLQMNYLTGKIPPELSSMRSLTTLDLSINGLSGEIPETFSKLKNLTLINFFQNKLCGSIPAFVGDLPNLESLQVWDNNFSFVLPQNLGSNGKFIYFDVTKNHLTGLIPPELCKSKKLKTFIVTDNFLSGPIPNGIGACKSLEKIRVANNYLDGMVPLGIFQLPSVTIMELENNRFNGQLPSEISGNSLGILTLSNNLFTGRIPASMKNLQSLQTLLLDANQFVGEIPAEVFALPVLTRINISGNNLTGGIPMTVTQCSTLTAVDFSRNMLTGEVPKGMKNLKVLSILNVSHNSISGQIPDDIRFMMSLTTLDLSYNNFTGIVPSDGQFLVFNDRSFAGNPSLCFPLQTTCSSLLYPSRKRHAKEKAIVIAIVFAIVVLMVIVTLHMMRKRKRHMAKAWKLTAF 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02350 671 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 9 347 - -
Mepo2g02350 671 Gene3D Ribonuclease Inhibitor 138 225 IPR032675 -
Mepo2g02350 671 Gene3D Ribonuclease Inhibitor 226 331 IPR032675 -
Mepo2g02350 671 Pfam Leucine Rich repeat 574 588 IPR001611 GO:0005515
Mepo2g02350 671 SUPERFAMILY RNI-like 72 280 - -
Mepo2g02350 671 SMART LRR_typ_2 477 501 IPR003591 -
Mepo2g02350 671 SMART LRR_typ_2 286 309 IPR003591 -
Mepo2g02350 671 SMART LRR_typ_2 189 213 IPR003591 -
Mepo2g02350 671 SMART LRR_typ_2 430 454 IPR003591 -
Mepo2g02350 671 SMART LRR_typ_2 334 358 IPR003591 -
Mepo2g02350 671 SMART LRR_typ_2 116 140 IPR003591 -
Mepo2g02350 671 SMART LRR_typ_2 573 596 IPR003591 -
Mepo2g02350 671 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 226 330 - -
Mepo2g02350 671 Pfam Leucine Rich Repeat 240 262 IPR001611 GO:0005515
Mepo2g02350 671 Gene3D Ribonuclease Inhibitor 333 621 IPR032675 -
Mepo2g02350 671 Pfam Leucine rich repeat 167 224 IPR001611 GO:0005515
Mepo2g02350 671 ProSiteProfiles Leucine-rich repeat profile. 575 596 IPR001611 GO:0005515
Mepo2g02350 671 FunFam LRR receptor-like serine/threonine-protein kinase EFR 331 622 - -
Mepo2g02350 671 SUPERFAMILY RNI-like 251 594 - -
Mepo2g02350 671 Gene3D Ribonuclease Inhibitor 23 137 IPR032675 -
Mepo2g02350 671 FunFam Leucine-rich repeat receptor-like protein kinase 21 184 - -
Mepo2g02350 671 Pfam Leucine rich repeat N-terminal domain 22 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02350 Mepo-Chr2 33323120 33325422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02350 24 671 Receptor kinase-like Gene Family AT1G75820 52.719 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02350 K00924 - mtr:11438702 1203.35