Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02347 ATGTCCAGCCCCATCGATCGTTTCGCTCTTCCATGTTTTGAAGGTTCTTCTGGCAGTGATGAAAAAAGAACTGAAAGAAAATCTGATTTTAAGATTTCTGGTAGTTCTAGTAATGGTGGTGGTGGTTCTCTTAAGAAGAAAGTATCCTCCAAGATTAAGCATTCTCTCAAGAAAAAGAGTGGTAGAAGAAAGAGTGATGGACGTGTTAGTTCTGTTTCCATTGAGGATATTCGTGATGTTGAGGAGCTTCAAGCTGTTGATGCTTTTCGCCAATCGTTGATCGCCGAGGAATTGCTTCCTCAAAAGCATGATGATTATCATTTGATGTTAAGATTTCTTAAAGCAAGGAAGTTTGATATTGAAAAAGCAAAGAATATGTGGGCTGATATGCTACAATGGAGGAAGGAATTTGGTGCTGATACAATTATGGAGGATTTTGAGTTCAACGAAATAAATGAAGTTGTTAAGTATTATCCACACGGGCATCATGGTGTTGATAAGGAGGGAAGGCCTGTTTACATTGAAAGACTTGGAAAAGTGGATCCAAACAAACTTATGCAAGTTACAACTATGGATAGATATGTGAAGTACCACGTACGCGAGTTTGAGAAATCTTTTGCGATTAAGTTTCCTGCTTGCACAATTGCTTCGAAGAGGCACATAGATTCCAGCACCACAATCTTAGATGTTCAAGGCGTGGGCCTTAAGAACTTTTCAAAAGCTGCACGCGAACTCATTATGCGATTACAAAAGATTGATGGTGACAATTACCCTGAGACTCTTCACCAAATGTTTATCATAAATGCTGGCCCTGGGTTTAGGATGCTGTGGAACAGTGTCAAATCTTTTATCGATCCCAAAACAACTTCAAAGATTCATGTTCTTGGAAACAAGTACCAAAGCAAATTGCTTGAAGTAATCAATGCCAGCGAGTTGCCAGAATTTTTGGGAGGTACCTGCACATGTTTAGATCAGGGAGGATGCCTCCGATCCGATAAAGGGCCCTGGAATAACCCGGAAATTATGAAGATGATTCTCAGCGGTGAAGCAGGGCGGCCAAGGCAGGTGGTAAAAGTTCTAAACAGTGAAGGGAAAGTTATTGCATACGCCAAGCCACGATGCCCAATGGTAAAAGGCAGTGATACATCCACAGCTGAATCGGGCTCTGAAGCTGAAGACATAGCTTCTCCAAAGGTGGTGAAGAGTTACTCACACCTGAGGTTGACTCCTGTTCGCGAGGAAGCTAAGGTAGTTGGAAAGTCAAGCTATGCTGTTAGTGGCGACTTAGCTGGGTATGATGAATACATTCCGATGGTGGACAAAGCGGTTGATGCTGTCTGGAAGAAGCAAGCATCACTCCATAGGTCTCATAGTACAAAAGGAACACCTCCCCTTCCCGACACGCCAAAACTACCAGAAGCTATTCAAGCTCGGATGTGGGTAGCCCTGACTGTTCTCTTTTGGACCATGTTTAGTCTCTTCCGTTCACTTGCATGTCGTATGACCAAGAAACTTCCATCAGTATCGTCTAATAGTTATCAGAGTACTTCAGAGCTAACTCTTGATACAACAAACAAGGAAGACTATACCGAGACCAGTGTCTTTTGCTCCATGATGAAAAGGTTAGGTGAGCTCGAAGAGAAGGTTGACTCACTAAAATCTAAGCCATCTGAGATGCCTAGACAGAAAGCAGAATTACTAAATGTTGCTGTCTACCGGGTGGATGCTTTGGAAGCAGAGCTAATCGCAACCAAAAAGGCTCTCTATGAAGCGTTAATGAGGCAAGAAGAGCTGCTTGCTTACATTGATAATCAAGAAGAAGCTAAGTTACGGAAGAAGAAATTTTGCTGGTGA 1854 0.4239 MSSPIDRFALPCFEGSSGSDEKRTERKSDFKISGSSSNGGGGSLKKKVSSKIKHSLKKKSGRRKSDGRVSSVSIEDIRDVEELQAVDAFRQSLIAEELLPQKHDDYHLMLRFLKARKFDIEKAKNMWADMLQWRKEFGADTIMEDFEFNEINEVVKYYPHGHHGVDKEGRPVYIERLGKVDPNKLMQVTTMDRYVKYHVREFEKSFAIKFPACTIASKRHIDSSTTILDVQGVGLKNFSKAARELIMRLQKIDGDNYPETLHQMFIINAGPGFRMLWNSVKSFIDPKTTSKIHVLGNKYQSKLLEVINASELPEFLGGTCTCLDQGGCLRSDKGPWNNPEIMKMILSGEAGRPRQVVKVLNSEGKVIAYAKPRCPMVKGSDTSTAESGSEAEDIASPKVVKSYSHLRLTPVREEAKVVGKSSYAVSGDLAGYDEYIPMVDKAVDAVWKKQASLHRSHSTKGTPPLPDTPKLPEAIQARMWVALTVLFWTMFSLFRSLACRMTKKLPSVSSNSYQSTSELTLDTTNKEDYTETSVFCSMMKRLGELEEKVDSLKSKPSEMPRQKAELLNVAVYRVDALEAELIATKKALYEALMRQEELLAYIDNQEEAKLRKKKFCW 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02347 617 SUPERFAMILY CRAL/TRIO domain 150 344 IPR036865 -
Mepo2g02347 617 Gene3D - 58 137 - -
Mepo2g02347 617 SMART sec14_4 150 321 IPR001251 -
Mepo2g02347 617 SUPERFAMILY CRAL/TRIO N-terminal domain 80 146 IPR036273 -
Mepo2g02347 617 SMART CRAL_TRIO_N_2 105 130 IPR011074 -
Mepo2g02347 617 MobiDBLite consensus disorder prediction 47 64 - -
Mepo2g02347 617 Pfam CRAL/TRIO, N-terminal domain 102 129 IPR011074 -
Mepo2g02347 617 MobiDBLite consensus disorder prediction 1 68 - -
Mepo2g02347 617 PRINTS Cellular retinaldehyde-binding protein signature 108 130 - -
Mepo2g02347 617 PRINTS Cellular retinaldehyde-binding protein signature 277 296 - -
Mepo2g02347 617 PRINTS Cellular retinaldehyde-binding protein signature 310 319 - -
Mepo2g02347 617 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 27 605 - -
Mepo2g02347 617 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 150 324 IPR001251 -
Mepo2g02347 617 Pfam CRAL/TRIO domain 157 318 IPR001251 -
Mepo2g02347 617 CDD SEC14 148 319 IPR001251 -
Mepo2g02347 617 Gene3D - 138 348 IPR036865 -
Mepo2g02347 617 FunFam SEC14 cytosolic factor 138 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02347 Mepo-Chr2 33246564 33252515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02347 84 315 Acyl Lipid Metabolism Gene Families AT5G47730 27.386 1.21e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02347 K26544 - gmx:100785793 963.37