LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g02284	ATGTGTCACATGATGATGTCTTTGAGGAGTCCTATGAATCAATGTCTTCTCAAAGTTCCCACCTTTCATCCCTTGTTCAAATTCAACAGAACTCATACTCATCATAACACCCTCTCATTCACCATCAACTGCAACCTCAAAAGCAAGGGAAAGAATAATAACTTGTTGTCACAGAAGATTGTTTTATCAGAATCTTCACCTCCACCACTCACACAGGATAATGATGATATCAACAGTGGAAATGTTCCAGCAAGCTCAAAGAACCAGAAAGGTCCTTATGGTGTGGTCAAGAAGTTGAGTAAAAAGGTGTTGCAAATTCTCTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATTGCTTTTTTAATGGGATTGGGCACTTTTATTGATCAAGGCGAGAAACCTGAGTTTTATTTCCAGAATTACCCTGAAGATCATCCTGTGTTAGGATTTTTTACTTGGAGATGGATTTTCTTCCTTGGTTTTGATCACATGTATTCAGCCCCTATATTTCTTGCAATGTTGGCCCTTCTTGGTGCATCCCTTATAGCCTGCACTTACACAACACAACTCCCACTCATCAAGGTTTCAAAAAGATGGTCATTTATGCACTCTGCCGAGGTTATACGTAAGCAAGAGTTTTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTCGGTACTATATTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCGACTTTGTATGCTTTTCGTGGACTTGCCGGTCGGCTAGCTCCTGTTGGCGTTCATATAGCACTGCTGTTGATAATGGGTGGAGGAACTTTAAGTGCTGCAGGGAGCTTTAAAGGTTCAGTCACTGTGCCTCAGGGGCTGAATTTTGTTGTAGGAGATGTTCTCGGTCCTACCGGCTTTCTTTCCTTTCCAACTGATGCTTTTAATACAGAGATTCATGTCAACAGATTCTCTATGGATTATTATGAAAGTGGGGAGGTTTCACAGTTTCACACCGATCTTTCCCTTTTGAACATGGATGGAAAAGAAGTAATGAGGAAAACAATTAGTGTAAACGACCCTTTAAGATATGAAGGTATCACCATATACCAGACGGATTGGAGTATTTCAGCTCTGCAAATTCTCAAGGACAACGAAGGACCTTATAACTTGGCTATGGCACCTCTAAAGATCAATGGAGATAAGAAACTTTATGGTACTTTTCTACCTGTTGGAGATGTTAACTCTCCAGATGTTAAGGGAATATCTATGCTTGCTCGTGACCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTTGCAGGAGTTAGACGACCTAATTCAAAGCTCCCAATCAACATTGATGGCTCAGAAATTGTCGTTGTTGATGCAATTGGCAGTAGTGGCTTGGACTTGAAGACTGATCCTGGTGTGCCAGTTGTATATGCTGGCTTTGGTGCTCTCATGCTCACTACTTGCATCAGCTATTTATCTCATTCTCAGATATGGGCCTTACAAGACGGAACAACAGTCGTTATCGGTGGGAAGACTAACAGAGCAAAGTTAGAGTTTCCGGACGAGATGAACCTCTTGCTTGACAAAATCCCTGAAATAGTTGAATCATCATCTCTATCTAAGCAAACTGATAGCATGGTTGGCTAG	1650	0.4115	MCHMMMSLRSPMNQCLLKVPTFHPLFKFNRTHTHHNTLSFTINCNLKSKGKNNNLLSQKIVLSESSPPPLTQDNDDINSGNVPASSKNQKGPYGVVKKLSKKVLQILSNLPLAIGEMFTIAFLMGLGTFIDQGEKPEFYFQNYPEDHPVLGFFTWRWIFFLGFDHMYSAPIFLAMLALLGASLIACTYTTQLPLIKVSKRWSFMHSAEVIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPTLYAFRGLAGRLAPVGVHIALLLIMGGGTLSAAGSFKGSVTVPQGLNFVVGDVLGPTGFLSFPTDAFNTEIHVNRFSMDYYESGEVSQFHTDLSLLNMDGKEVMRKTISVNDPLRYEGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVVVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTTVVIGGKTNRAKLEFPDEMNLLLDKIPEIVESSSLSKQTDSMVG	549

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g02284	549	PANTHER	CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC	53	538	IPR023494	-
	Mepo2g02284	549	Pfam	ResB-like family	112	376	IPR007816	-
	Mepo2g02284	549	Pfam	ResB-like family	410	524	IPR007816	-
	Mepo2g02284	549	MobiDBLite	consensus disorder prediction	64	88	-	-
	Mepo2g02284	549	Hamap	Cytochrome c biogenesis protein Ccs1 [ccs1].	100	529	IPR023494	-
	Mepo2g02284	549	MobiDBLite	consensus disorder prediction	64	89	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g02284	12	544	Miscellaneous Gene Families	AT1G49380	67.096	0.0	756

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g02284	K07399		-	gmx:100807003	865.529

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo2g02284	2	32514451	32518370	Mepo2g02284	2	32514451	32518370	ECH