Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02280 ATGGCGTTCTGTTCGAATCTTTGCCTACGTCTCCCCGCCACTCGCATCGACGTTCCTTCTCCGACCACTTTCCGCTGCCGCAAACTCTTCTCCGTCCGTTGCTCCGCCGATGCCGATTTCGACCCAAAACTCTTCCGTAAGAATCTCACAAGAAGTGAGAATTATAACCGCAAAGGCTTTGGTCATAAAGAAGAGACCCTCAAACTCATGAATCGCGAGTACACAAGTGACATCATTAAGACTTTGAAGGAAAATGGGTTTGAGTATACATGGGGTAATGTCACTGTGATGCTAGCCGAATCCTTTGGATTTTGCTGGGGGGTTGAGAGGGCTGTTCAAATTGCTTATGAAGCCAGGAAACAATTTCCTGATGAAAAAATTTGGATTACCAATGAAATTATTCACAACCCAACTGTTAATAAGCGGCTAGAGGAGATGGAAGTGCAGAATATTCCAATTGGAGAAGGGAAAAAACAATTTGAGGTTGTTAACAAGGGTGATGTAGTCATACTGCCTGCTTTTGGAGCCGCAGTTGACGAGATGTTGACCTTGAGTGAGAAAAATGTTCAAATCGTTGATACAACTTGCCCGTGGGTTTCAAAGGTATGGAATGTTGTCGAAAAGCACAAAAAAGGAGACTATACCTCGATAATTCATGGTAAATATGCCCATGAGGAAACCGTAGCAACTGCATCTTTTGCTGGAAAATACATAATTGTGAAAAATATGGCAGAGGCTGAATATGTTTGCGACTATATTCTTGGTGGTGAATTTAATGGATCCAGTTCAACCAGAGAGGCATTTTTCGAGAAATTTAAATTTGCACTTTCTAAGGGCTTTGATCCAGACAGTGACCTGATAAAACTTGGCATTGCAAATCAGACAACAATGCTCAAGGGAGAGACTGAAGAGATTGGCAGACTAGTGGAGAGGACTATGATGCGCAAATATGGCGTGGAAAACGTTACAGAGCACTTCATAAGCTTCAACACAATTTGTGATGCTACTCAGGAGCGACAAGATGCTATTTACAAGCTGGTGGAGAAAGAAATGGATCTTATGTTAGTTGTTGGTGGCTGGAACTCGAGCAACACATCACACCTACAAGAGATAGCCGAGGAACGCGGAATTCCTTCTTACTGGATTGACAGCGAGCAAAGAATTGGTCCAGGAAACAGAATAGCATACAAGTTGAATCATGGCGAGCTTGTGGAGAAAGAAAACTTTCTACCAAAGGGTCCATTAAGGATTGGTGTAACATCTGGTGCATCCACACCTGACAAGGTCGTGGAAGATGCGCTTATCAAGGTGTTTGATTTGAAAAGGGAAGAAGCATTACAACTCGTGTAA 1350 0.4289 MAFCSNLCLRLPATRIDVPSPTTFRCRKLFSVRCSADADFDPKLFRKNLTRSENYNRKGFGHKEETLKLMNREYTSDIIKTLKENGFEYTWGNVTVMLAESFGFCWGVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVQNIPIGEGKKQFEVVNKGDVVILPAFGAAVDEMLTLSEKNVQIVDTTCPWVSKVWNVVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKNMAEAEYVCDYILGGEFNGSSSTREAFFEKFKFALSKGFDPDSDLIKLGIANQTTMLKGETEEIGRLVERTMMRKYGVENVTEHFISFNTICDATQERQDAIYKLVEKEMDLMLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENFLPKGPLRIGVTSGASTPDKVVEDALIKVFDLKREEALQLV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02280 449 Hamap 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 94 441 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Mepo2g02280 449 PANTHER 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC 33 447 - -
Mepo2g02280 449 CDD lytB_ispH 96 434 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Mepo2g02280 449 NCBIfam 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 96 434 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Mepo2g02280 449 Gene3D - 105 195 - -
Mepo2g02280 449 Pfam LytB protein 96 434 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Mepo2g02280 449 Gene3D - 196 329 - -
Mepo2g02280 449 Gene3D - 330 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02280 Mepo-Chr2 32484084 32488010 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02280 K03527 - gmx:100818067 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02280 2 32484084 32488010 Mepo2g02280 2 32484084 32488010 ECH