Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02221 ATGGGAATCACAAGTCATCTTCTTATTCTTAAGCTCTTTCTTTTCCTTCTAATAATCACTTTTCATTCTTCATTTGCTGAAGTCTTCTTCGAAGAAACATTCCAAGATGGGTGGAAGAGTCGTTGGGTATTGTCTGATTGGAAAAGGAGTGAAGGAAAAGCAGGTACCTTTAAGTATACTGCTGGAAAATGGCCTGCTGATCCTGATGACAAAGGTATTCAGACATATAATGATGCCAAGCATTTTGCCATATCTGCAAAGATACCGGAGTTGACCAATAAGAACAGAACACTGGTGCTTCAATATTCTATTAAATTTGAACAGGATATTGAGTGTGGTGGTGGATACATCAAACTTCTTTCTGGTTATGTCAATCAGAAGAAGTTTGGCGGTGATACTCCTTATAGTTTGATGTTTGGACCGGATCTATGTGGTACACAAACAAAGAAGCTCCATGTTATATTGTCATACCAGGGGCAGAATTATCCTATTAGGAAGGATCTGGAGTGTGAAACTGACAAATTAACTCATTTCTATACATTCATTCTGAGGCCTGATGCCTCCTATAGTGTCCTTGTCGATAATCGAGAAAGAGATTCTGGTAGCATGTACACAGATTGGGACATCCTTCCTCCAAGGAAAATCAAGGATGTCAAAGCGAAAAAGCCAGCAGATTGGGATGATAGAGAGTACATTGAGAACCCTGATGATGTCAAACCAGAGGGATATGATTCAATTCCAGCGGAAATTCCCGATCCGAAAGCCAAAAAGCCTGTTGACTGGGATGATGAAGATGATGGACTATGGAAGCCTTCCAAAATTCCTAATCCAGCATACAGAGGACCATGGAAACGAAAGAAAATCAAGAACCCCAACTACAAGGGAAAGTGGAAGACTCCATGGATTGATAACCCAGAATTTGAGGATGATCCTGATCTTTATGTGCTGAAACCAATAAAGTATGTTGGCATTGAAGTGTGGCAGGTAAAGGCTGGTTCTATTTATGACAACGTCTTAATTTGTGATGACCCACAGTATGCAAAGCAAGTTGTTGAAGAATACATGGTTAATAATAGGGAGGCTGAAAAAGAAGCTTTTGAAGAAGCGGAAAAAGAAAGAAGGGCTCGGGAAGAAGAGGAGGCACGGAGGGCAAGAGAAGAGGGCGAAAAGAGGAGGAGAGAGAGGGGCAGTAGATATGGAGATAAGAGGCGCCGTAGGAGGCCGGATCCCCACGAATACATGGATGATTATGGACATGATGAACTTTGA 1269 0.4153 MGITSHLLILKLFLFLLIITFHSSFAEVFFEETFQDGWKSRWVLSDWKRSEGKAGTFKYTAGKWPADPDDKGIQTYNDAKHFAISAKIPELTNKNRTLVLQYSIKFEQDIECGGGYIKLLSGYVNQKKFGGDTPYSLMFGPDLCGTQTKKLHVILSYQGQNYPIRKDLECETDKLTHFYTFILRPDASYSVLVDNRERDSGSMYTDWDILPPRKIKDVKAKKPADWDDREYIENPDDVKPEGYDSIPAEIPDPKAKKPVDWDDEDDGLWKPSKIPNPAYRGPWKRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIYDNVLICDDPQYAKQVVEEYMVNNREAEKEAFEEAEKERRAREEEEARRAREEGEKRRRERGSRYGDKRRRRRPDPHEYMDDYGHDEL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02221 422 MobiDBLite consensus disorder prediction 361 396 - -
Mepo2g02221 422 SUPERFAMILY P-domain of calnexin/calreticulin 208 323 IPR009033 GO:0005509|GO:0005515
Mepo2g02221 422 MobiDBLite consensus disorder prediction 403 422 - -
Mepo2g02221 422 MobiDBLite consensus disorder prediction 226 272 - -
Mepo2g02221 422 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 225 IPR013320 -
Mepo2g02221 422 FunFam Calreticulin 212 313 - -
Mepo2g02221 422 FunFam Calreticulin 1b 27 211 - -
Mepo2g02221 422 MobiDBLite consensus disorder prediction 361 422 - -
Mepo2g02221 422 PANTHER CALRETICULIN AND CALNEXIN 12 387 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 MobiDBLite consensus disorder prediction 226 243 - -
Mepo2g02221 422 PRINTS Calreticulin signature 321 341 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 PRINTS Calreticulin signature 222 235 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 PRINTS Calreticulin signature 250 272 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 PRINTS Calreticulin signature 133 149 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 PRINTS Calreticulin signature 107 125 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 PRINTS Calreticulin signature 288 307 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 Gene3D - 27 382 - -
Mepo2g02221 422 Gene3D Calreticulin/calnexin, P domain 201 321 IPR009033 GO:0005509|GO:0005515
Mepo2g02221 422 PIRSF Calreticulin 6 421 IPR009169 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 MobiDBLite consensus disorder prediction 250 270 - -
Mepo2g02221 422 ProSitePatterns Calreticulin family signature 2. 137 145 IPR018124 GO:0005509
Mepo2g02221 422 Coils Coil 358 394 - -
Mepo2g02221 422 ProSitePatterns Calreticulin family signature 1. 105 120 IPR018124 GO:0005509
Mepo2g02221 422 Pfam Calreticulin family 30 264 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo2g02221 422 Pfam Calreticulin family 267 340 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02221 Mepo-Chr2 31994277 32002849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02221 9 348 Miscellaneous Gene Families AT5G61790 33.249 1.23e-61 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02221 K08057 - gmx:100802428 701.434