Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02093 ATGTTGTCTGAGTTGGGAAGAAGACCTGTTATTGGCAATAACGAGGGTTGTTTTGGTGATGAATTGGAGAAGGAAATAGGGATGTTGCTCCGTGAGCAACGGAGGCAAGAAGGCGATGATCGCGAAAGAGAGTTGAATATATTTAGGAGTGGATCAGCTCCTCCTACTGTGGAGGGTTCTTTGAATGCTGTTGGAGGGTTGTTTGGTGGTGGCGGCGGTGGTGGTGGTGGTGTTGCTGGTGGTTTTTCAGATTTTCCGGGGAATAAAGATGTGAATGGTGTTGTTTCTGAGGAAGAGCTTAGGTCTGATCCAGCTTATCTTCAGTACTATTACTCAAATGTCAATTTGAATCCTAGGCTTCCACCTCCTTTATTGTCAAAGGAAGATTGGAGGTTTCAACAAAGGCTTAAAGGTGGGGCCTCAGCTGTAGGTGGAATTGGAGATAGGAGAAAAGGTAACATGACTGATGATAGTGGTGGTAGGTCAATGTTTTCGACGCCACCTGGTTTTAACTTTAGGAAGCAAGAAAGGAATGAGGTGGAGAATGAAAAGACTAGAGGTTCTGCTGAATGGGGTGGTGATGGTTTGATTGGTTTGCCTAGCTTGGGACTTAGAAGCAAACAAAAGAGCCTTGCTGAAATTTTTCAGGATGATATGGAGCGTAACACCCCTGTCACAGGCCTTCCTTCTCGTCCAGCAAGTCGGAATGCATTTGATGAAAATGTTGATAAAGTAAATACTTCTGAAGCAGAGTTAGCTCATGTTCAAGGATCATCTGCAACACAAAATATTGGTCTGCCAGCTTCGTATTCTTATGCTGCTGCACTAGGAGGATCTTCATTGTCAAGAAGCACTACTCCTGATCCACAACATATTGCTAGGGCTCCTAGTCCATGCCTCACACCTATTGGCGGAGGGAGAAATGTTGCTTCTGACAAGAGAGGCATTGTCAGTCCAGATTCATTTAACGGCGTTTCATCTGGCTTGAACGAGTCAGCAGATCTTGTGGCTGCTTTATCCGGGATGAACTTGTCATCAGAAGATGAAAACCATTTGCCATCACAGGTTGAGTCAGATGTCGATAATCATCAGAGATATCTTTTTGGTATGCAGGGTGGTCAAGAGCACGGCAAGCAACATCCATATCTAAAAAAATCTGAATCAGGGCATTTGCAAAGTTCAGGTAAGAGCAGGCCAGACCTTAATAATCTGTCCCTGCACAGGCAGGCTGAGCTACAAAACTCGACTGCTCCTTTGAATAACTCATATTTCAAAGGATCACCTACCTCCCATTTTAGTGGAGGAGGTAATATGCAAGCTCAGTATCAGTCTATAGATGGTATGAATTCATCATTCACTAACTATGGCTTAAGCGGCTATGGTGGAAATCCTGCAGCATTGACATCCTTGATGACTAACCAATATGGCACCAGTAATCTGCCACCGATGTTTGAAAACGTTGCGGCAGCATCCATGATGGCATCCCCTGGAATGGACTCGAGAATTCTTGGAGGCGGTCTGGCTTCGGGAGCTGGTTCTCCTTCTGATGTGCATAATCTTGGTCGGATGGGAAATCAAATTGCTGGGGGTGCTCTTCCGGCTCCATTTGTTGATCCGATGTATCTTCAGTATATGAGGACGACTGAGTATGCTGCGGCACAACTCGCTGCTCTTAACGACCCCTCTGTGGACAGGAACTACTTGGGTAATTCGTACATGAATTTACTTGAGCTGCAGAAAGCCTACCTCGGGTCTGTTCTCTCGCCTCAAAAGTCGCAGTACAATGCACAACTTGGTGGTAAATCAGGCAACTCCAATCACCATGGTTACTATGGAAATCCGGCATATGGTGTTGGGTTGTCTTATCCAGGAAGTCCAATGACAAACTCTGGTTCTCCAGTTGGATCCGGAAGTCCAATTAGGCACAATGATCTGAACAACATGCGTTTTGCTTCTGGAATGAGGAACTTGGCTGGGGTCATGGGACCTTGGCATGTAGATTCCGGGAATATGGATGAAAGCTTCGCTTCTTCTCTGTTGGAAGAGTTTAAAAGCAATAAAGCCAAGTGTTTTGAACTCTCTGAAATTGCCGGACATGTTGTTGAATTCAGTGCGGATCAATATGGAAGCCGATTTATTCAACAGAAGCTTGAAACAGCAACTACAGAAGAAAAAGACATGGTTTATCAGGAAATCATGCCACATGCTCTTGCTTTGATGACCGATGTCTTTGGTAATTATGTGGTTCAAAAGTTTTTTGAGCATGGGCTTGCACCCCAGAGAAGAGAATTAGCAAACAAGCTTATTGGCCACGTTCTTACACTTAGCCTTCAGATGTATGGTTGCCGGGTTATTCAGAAGGCCATTGAAGTTGTTGATCTGGATCAGAAAATAGAGATGGTTAAAGAGCTTGATGGTAATATCATGCGCTGTGTTCGTGATCAGAATGGTAATCATGTCATTCAGAAATGTATTGAATGTGTCCCTGAAGATGCGATCGACTTTATTGTTTCAACATTTTTCGATCAAGTTGTGACACTCTCAACCCATCCATATGGTTGTCGTGTGATACAGAGAGTACTGGAGCACTGTGAAAGCCCTGCAACACAGCAGAAAGTTATGGACGAGATTTTAGGCGCTGTTAGCATGCTAGCTCAGGATCAGTATGGCAACTACGTTGTTCAGCATGTACTGGAACATGGGAAGCCTCATGAGCGTTCTACCATAATAAAGGAGTTAGCAGGGAAGATAGTTCAAATGAGTCAACAAAAGTTTGCCTCCAATGTTGTGGAGAAGTGTCTGACCTTCAGTGGTCCTGCAGAACGCCAAATACTAGTCAGTGAGATGCTTGGAACCACGGATGAAAATGAACCTCTTCAGGCAATGATGAAAGATCAATTTGCAAATTATGTTGTCCAAAAGGTGCTGGAAACATGTGATGACCATCAACGTGAACTGATTCTTTCACGAATCAAGGTTCATTTGAATGCATTGAAAAAGTACACCTATGGAAAGCACATTGTCGCACGTGTAGAGAAGCTTGTTGCTGCTGGAGAGAGAAGAATGGCTGCTCAGACTCCTCAACCTGCTTAG 3093 0.4433 MLSELGRRPVIGNNEGCFGDELEKEIGMLLREQRRQEGDDRERELNIFRSGSAPPTVEGSLNAVGGLFGGGGGGGGGVAGGFSDFPGNKDVNGVVSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASAVGGIGDRRKGNMTDDSGGRSMFSTPPGFNFRKQERNEVENEKTRGSAEWGGDGLIGLPSLGLRSKQKSLAEIFQDDMERNTPVTGLPSRPASRNAFDENVDKVNTSEAELAHVQGSSATQNIGLPASYSYAAALGGSSLSRSTTPDPQHIARAPSPCLTPIGGGRNVASDKRGIVSPDSFNGVSSGLNESADLVAALSGMNLSSEDENHLPSQVESDVDNHQRYLFGMQGGQEHGKQHPYLKKSESGHLQSSGKSRPDLNNLSLHRQAELQNSTAPLNNSYFKGSPTSHFSGGGNMQAQYQSIDGMNSSFTNYGLSGYGGNPAALTSLMTNQYGTSNLPPMFENVAAASMMASPGMDSRILGGGLASGAGSPSDVHNLGRMGNQIAGGALPAPFVDPMYLQYMRTTEYAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSVLSPQKSQYNAQLGGKSGNSNHHGYYGNPAYGVGLSYPGSPMTNSGSPVGSGSPIRHNDLNNMRFASGMRNLAGVMGPWHVDSGNMDESFASSLLEEFKSNKAKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKDMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAPQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEKCLTFSGPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMAAQTPQPA 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02093 1030 SMART pum_5 954 989 IPR001313 GO:0003723
Mepo2g02093 1030 SMART pum_5 876 911 IPR001313 GO:0003723
Mepo2g02093 1030 SMART pum_5 839 875 IPR001313 GO:0003723
Mepo2g02093 1030 SMART pum_5 695 730 IPR001313 GO:0003723
Mepo2g02093 1030 SMART pum_5 731 766 IPR001313 GO:0003723
Mepo2g02093 1030 SMART pum_5 912 947 IPR001313 GO:0003723
Mepo2g02093 1030 SMART pum_5 803 838 IPR001313 GO:0003723
Mepo2g02093 1030 SMART pum_5 767 802 IPR001313 GO:0003723
Mepo2g02093 1030 MobiDBLite consensus disorder prediction 158 172 - -
Mepo2g02093 1030 FunFam Pumilio homolog 1 isoform 2 674 1021 - -
Mepo2g02093 1030 SUPERFAMILY ARM repeat 678 1012 IPR016024 -
Mepo2g02093 1030 ProSiteProfiles Pumilio RNA-binding repeat profile. 767 802 IPR001313 GO:0003723
Mepo2g02093 1030 MobiDBLite consensus disorder prediction 174 188 - -
Mepo2g02093 1030 CDD Pumilio 691 1011 IPR033712 GO:0003723
Mepo2g02093 1030 ProSiteProfiles Pumilio RNA-binding repeat profile. 876 911 IPR001313 GO:0003723
Mepo2g02093 1030 MobiDBLite consensus disorder prediction 138 192 - -
Mepo2g02093 1030 Pfam Pumilio-family RNA binding repeat 814 837 IPR001313 GO:0003723
Mepo2g02093 1030 Pfam Pumilio-family RNA binding repeat 917 950 IPR001313 GO:0003723
Mepo2g02093 1030 Pfam Pumilio-family RNA binding repeat 771 804 IPR001313 GO:0003723
Mepo2g02093 1030 Pfam Pumilio-family RNA binding repeat 843 878 IPR001313 GO:0003723
Mepo2g02093 1030 Pfam Pumilio-family RNA binding repeat 699 733 IPR001313 GO:0003723
Mepo2g02093 1030 Pfam Pumilio-family RNA binding repeat 882 913 IPR001313 GO:0003723
Mepo2g02093 1030 Pfam Pumilio-family RNA binding repeat 962 991 IPR001313 GO:0003723
Mepo2g02093 1030 Pfam Pumilio-family RNA binding repeat 735 769 IPR001313 GO:0003723
Mepo2g02093 1030 ProSiteProfiles Pumilio RNA-binding repeat profile. 839 875 IPR001313 GO:0003723
Mepo2g02093 1030 ProSiteProfiles Pumilio RNA-binding repeat profile. 695 730 IPR001313 GO:0003723
Mepo2g02093 1030 MobiDBLite consensus disorder prediction 281 300 - -
Mepo2g02093 1030 Pfam Nucleic acid binding protein NABP 294 694 IPR012940 -
Mepo2g02093 1030 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 675 1015 IPR033133 GO:0003723
Mepo2g02093 1030 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 106 1014 - -
Mepo2g02093 1030 MobiDBLite consensus disorder prediction 372 402 - -
Mepo2g02093 1030 Gene3D - 675 1021 IPR011989 -
Mepo2g02093 1030 ProSiteProfiles Pumilio RNA-binding repeat profile. 731 766 IPR001313 GO:0003723
Mepo2g02093 1030 ProSiteProfiles Pumilio RNA-binding repeat profile. 803 838 IPR001313 GO:0003723
Mepo2g02093 1030 ProSiteProfiles Pumilio RNA-binding repeat profile. 912 947 IPR001313 GO:0003723
Mepo2g02093 1030 MobiDBLite consensus disorder prediction 386 402 - -
Mepo2g02093 1030 ProSiteProfiles Pumilio RNA-binding repeat profile. 948 989 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02093 Mepo-Chr2 30430823 30437326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02093 K17943 - gmx:100803806 1676.37