Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02056 ATGGGTCAAGGTGGTCTTAGTTGTAGAGGTAGTCATGAACATGGACTCTTTCGTGCTGTCCAACATGGTGACCTGAAAACTGTTTCTACTCTTTTACAGACTCACCCTTCTCTTCTCAATCGTACTACTGTTTATGATCATCATTCCCCTCTTCATATTGCTGCTGCCAATGGTCAGATCCAGGTTTTGTCTAGGCTTTTAGATGGATCTACGAATCCAGATGTGTTGAATCGACAAAAGCAGACCCCACTTATGTTGGCAGCAATGCATGGAAAGATTGATTGTGTGGAAAAGTTGCTTGAAGCTGGTGCTAATGTTTTAATGTTTGATGTGTGTCATGGAAGAACTTGCTTGCATTATGCTGCTTACTATGGTCATTCTTCTTGCCTTAAGGCAATACTTTCTGCTGCTCAATCTAGTCCTGTGGCTGCTTCTTGGGGGTTTGCACGGTTTGTGAATATTAGAGACGGTAGAGGTGCTACACCGTTGCATTTGGCAGCTCGTCAAAAACGGCATGAATGTGTGCACATTCTGTTGTGTAGTGGAGCTCTTGTTTGTGCTTCAACTAGCAGATACGGATGTCCCGGGAGTACTCCACTTCATCTAGCAGCTAAAGGAGGATCTCTCGATTGCATCCGCGAATTACTAGCATGGGGTGCAGATCGTCTCCAACGTGATGCATCTGGGCGGATACCATATGTGGTTGCTTTGAAGTACAAGCATGGAGCATGTGCAGCATTGCTAAATCTTTCATCTGCACAGCCTCTTGTATGGCCATCATCATTGAAGATAATCAGTGAGCTTAATCCAGAGGCTAAAGTTTTATTAGAGCAGGCCTTGTTGGATGCAAACAGGGAAAGGGAGAAAAACATATTGAAAGGCAGTCCTTACTCTCTTCCATCTGCTCACTCTGATCGAATAGATGACAATATCTCTGAGGTTAGCGAGACGGAATTATGCTGCATCTGCTTTGAGCAGGTGTGTACAATTGAAGTCCAAGACTGTGGCCACCAGATGTGTGCACAATGCACACTAACACTCTGTTGTCACAACAAGGCCAACACTTCAACTTCGCATCCCACCCCACCCATTTGTCCATTCTGTCGAAGCGCCATATCTAAACTGATGGTTATCAAGGTAGAAACTCACGAAGACATGGATCTAGACGGTGCTGATACCACTTGTTTCAAGCCAAGCAAGTCAAGGAAATTTCGTAACATGAACGAGGGTAGCAGCAGCAGTTTCAAGGGATTGTCCAATGTAAATTCATTCGGAAAAATGAGCGGCCGTAGTTCCGGGATGATTGCTTCCGAAAATGAATGGGTTGATGATAAGCCACAATGA 1344 0.4464 MGQGGLSCRGSHEHGLFRAVQHGDLKTVSTLLQTHPSLLNRTTVYDHHSPLHIAAANGQIQVLSRLLDGSTNPDVLNRQKQTPLMLAAMHGKIDCVEKLLEAGANVLMFDVCHGRTCLHYAAYYGHSSCLKAILSAAQSSPVAASWGFARFVNIRDGRGATPLHLAARQKRHECVHILLCSGALVCASTSRYGCPGSTPLHLAAKGGSLDCIRELLAWGADRLQRDASGRIPYVVALKYKHGACAALLNLSSAQPLVWPSSLKIISELNPEAKVLLEQALLDANREREKNILKGSPYSLPSAHSDRIDDNISEVSETELCCICFEQVCTIEVQDCGHQMCAQCTLTLCCHNKANTSTSHPTPPICPFCRSAISKLMVIKVETHEDMDLDGADTTCFKPSKSRKFRNMNEGSSSSFKGLSNVNSFGKMSGRSSGMIASENEWVDDKPQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02056 447 SUPERFAMILY Ankyrin repeat 16 248 IPR036770 -
Mepo2g02056 447 SMART ANK_2a 113 143 IPR002110 GO:0005515
Mepo2g02056 447 SMART ANK_2a 46 75 IPR002110 GO:0005515
Mepo2g02056 447 SMART ANK_2a 79 108 IPR002110 GO:0005515
Mepo2g02056 447 SMART ANK_2a 11 40 IPR002110 GO:0005515
Mepo2g02056 447 SMART ANK_2a 158 187 IPR002110 GO:0005515
Mepo2g02056 447 SMART ANK_2a 195 224 IPR002110 GO:0005515
Mepo2g02056 447 Pfam Ankyrin repeats (3 copies) 16 110 IPR002110 GO:0005515
Mepo2g02056 447 Pfam Ankyrin repeats (3 copies) 113 183 IPR002110 GO:0005515
Mepo2g02056 447 Gene3D - 199 253 IPR036770 -
Mepo2g02056 447 Gene3D - 146 198 IPR036770 -
Mepo2g02056 447 ProSiteProfiles Ankyrin repeat region circular profile. 158 183 - -
Mepo2g02056 447 ProSiteProfiles Ankyrin repeat profile. 195 227 IPR002110 GO:0005515
Mepo2g02056 447 ProSiteProfiles Ankyrin repeat profile. 158 190 IPR002110 GO:0005515
Mepo2g02056 447 ProSiteProfiles Ankyrin repeat profile. 46 78 IPR002110 GO:0005515
Mepo2g02056 447 ProSiteProfiles Ankyrin repeat region circular profile. 46 78 - -
Mepo2g02056 447 ProSiteProfiles Ankyrin repeat region circular profile. 79 106 - -
Mepo2g02056 447 Pfam Ankyrin repeats (many copies) 196 233 IPR002110 GO:0005515
Mepo2g02056 447 Gene3D - 10 145 IPR036770 -
Mepo2g02056 447 SUPERFAMILY RING/U-box 319 375 - -
Mepo2g02056 447 MobiDBLite consensus disorder prediction 427 447 - -
Mepo2g02056 447 ProSiteProfiles Ankyrin repeat profile. 79 111 IPR002110 GO:0005515
Mepo2g02056 447 ProSiteProfiles Zinc finger RING-type profile. 320 369 IPR001841 -
Mepo2g02056 447 PANTHER HOMEOBOX PROTEIN WARIAI 25 377 - -
Mepo2g02056 447 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 301 388 IPR013083 -
Mepo2g02056 447 ProSiteProfiles Ankyrin repeat region circular profile. 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02056 Mepo-Chr2 29922804 29926551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02056 13 330 Miscellaneous Gene Families AT5G60070 26.488 2.28e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02056 - - gmx:100800611 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03918 6 51532163 51535381 Mepo2g02056 2 29922804 29926551 PCT