Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02042 ATGGCGTCTCAAGCCAGCCTTCTTCTTCAAAAACAGCTCAAAGATCTTTGCAAAAACCCTGTCGATGGATTTTCTGCTGGTTTGGTTGATGAAAACAATATTTTTGAATGGAGTGTCACCGTAATTGGTCCTCCTGATACTCTCTATGAGGGAGGGTTTTTCAATGCCATCATGAGTTTTCCTTCCAATTACCCAAATAGTCCACCAACAGTGAAATTTACTTCAGAGATATGGCATCCTAATGTATACACTGATGGCCGGGTTTGCATATCAATCCTCCATCCTCCTGGTGACGATCCTAATGGTTATGAGCTAGCAAGTGAGCGCTGGACACCTGTTCATACCGTAGAGAGTATAGTATTGAGTATCATATCAATGCTTTCCAGTCCTAATGACGAATCTCCTGCAAATGTTGAAGCAGCAAAAATGTGGAGAGATAATAGAGATGAATTCCGGAAGAAGGTTGGTCGATGTGTAAGGAAGTCACAAGAAATGTTGTGA 501 0.4172 MASQASLLLQKQLKDLCKNPVDGFSAGLVDENNIFEWSVTVIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKMWRDNRDEFRKKVGRCVRKSQEML 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02042 166 CDD UBCc 17 159 IPR000608 -
Mepo2g02042 166 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 163 - -
Mepo2g02042 166 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 78 93 IPR023313 -
Mepo2g02042 166 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 4 164 IPR000608 -
Mepo2g02042 166 Gene3D Ubiquitin Conjugating Enzyme 2 166 IPR016135 -
Mepo2g02042 166 FunFam ubiquitin-conjugating enzyme E2 7 2 166 - -
Mepo2g02042 166 SUPERFAMILY UBC-like 3 162 IPR016135 -
Mepo2g02042 166 SMART ubc_7 7 164 - -
Mepo2g02042 166 Pfam Ubiquitin-conjugating enzyme 9 158 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02042 Mepo-Chr2 29706277 29709770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02042 11 131 Miscellaneous Gene Families AT3G17000 31.746 6.50e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02042 K10575 - fve:101292976 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03915 6 51451981 51456755 Mepo2g02042 2 29706277 29709770 PCT