Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01990 ATGAAAAACACCGATATTCAATGCAATGAAACGGTTTTCATTGCGCTTTTTCAACATTATGGCCCGTTAAAAGCCATTGAACTCTTTCGGGCAATGCCGAAATTCAACTGTGTACGTACATTGCAGTCTTTTAATGCACTTCTGAATATTTTAGTTGATCATGGTATGTTTTGTGAGGCTAATGATGCTTTTGAGAGGTGTTATGAAATGGGTTTTCGACCGAATACAGTTACTTTTAATATTATGATGAAGGGTTGGTTGAAAAAAGGTGAATGGGAGAATGCGTGTAAGGTGTTTGATGAAATGCTTGAGAGAAAAGTGCAGCCTAGTGTTGTTAGTTATAATAGTTTGATTGGGTTTTTGTCGAGGAAGGGTGATTTGGATAAAGCGATGAGGTTGGTTGAGGATATGAGACGGAAAGGGAAGCGTGCGAATGGGGTGACGTATGCGCTTTTGATGGAGGGTTTGTGTAGTTTGGGAAAGTATGAGGAAGCTAAGAAGTTGATGTTTGATATGGCGTATCGTGGGTGTAAACCTCAACTTGTGAATTTTTCTGTTTTGATGAATGATCTTGGGAAGAGAGGGAAGATTGATGAGGCGATGGTTTTGTTTCGGGAGATGAGAAAGAGACGACTTAAGCCGGATGTTGTGACGTATAATGTGTTTGTGAATTATCTTTGTAAGGAAGGGAAGACGGCGGAAGCTTATAAGATATTAGTTGAGATGCAGATTGGTGGTTGTGAGCCGAATGCGGCCACGTATAGGATGTTGCTTGATGGTTTGTGTCGGAATGGGGATTTTGAGAGTGGGTTGAGTGTTTTGAATTTGATGTTTGCGAGTAGACATTGCCCGCGATCGGATACGTTTAATTGTTTGGTTGTTGGGTTATTAAAATCTGGGAATATCGATGGTGGATGCTTTGTTTTGGAAGAGATGGTGAAGAGAAAGGTAGATTTTGATTTGGAGAGCTGGGAAGCTGTGATAAAATATGCTTGCAGTGAGGATGATAAGGGTGGCAGTATGCTTTTGACTACACTTGCAGGTTGA 1047 0.4078 MKNTDIQCNETVFIALFQHYGPLKAIELFRAMPKFNCVRTLQSFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKILVEMQIGGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPRSDTFNCLVVGLLKSGNIDGGCFVLEEMVKRKVDFDLESWEAVIKYACSEDDKGGSMLLTTLAG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01990 348 Gene3D Tetratricopeptide repeat domain 246 338 IPR011990 GO:0005515
Mepo2g01990 348 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 250 284 IPR002885 -
Mepo2g01990 348 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 145 179 IPR002885 -
Mepo2g01990 348 Pfam PPR repeat 288 316 IPR002885 -
Mepo2g01990 348 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 110 144 IPR002885 -
Mepo2g01990 348 Pfam PPR repeat family 214 263 IPR002885 -
Mepo2g01990 348 Pfam PPR repeat family 74 118 IPR002885 -
Mepo2g01990 348 NCBIfam pentatricopeptide repeat 288 317 IPR002885 -
Mepo2g01990 348 NCBIfam pentatricopeptide repeat 77 110 IPR002885 -
Mepo2g01990 348 NCBIfam pentatricopeptide repeat 147 179 IPR002885 -
Mepo2g01990 348 NCBIfam pentatricopeptide repeat 184 216 IPR002885 -
Mepo2g01990 348 NCBIfam pentatricopeptide repeat 112 141 IPR002885 -
Mepo2g01990 348 NCBIfam pentatricopeptide repeat 253 284 IPR002885 -
Mepo2g01990 348 NCBIfam pentatricopeptide repeat 217 251 IPR002885 -
Mepo2g01990 348 Pfam Pentatricopeptide repeat domain 132 194 IPR002885 -
Mepo2g01990 348 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 215 249 IPR002885 -
Mepo2g01990 348 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 40 74 IPR002885 -
Mepo2g01990 348 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Mepo2g01990 348 Gene3D Tetratricopeptide repeat domain 7 103 IPR011990 GO:0005515
Mepo2g01990 348 Gene3D Tetratricopeptide repeat domain 104 172 IPR011990 GO:0005515
Mepo2g01990 348 Gene3D Tetratricopeptide repeat domain 173 244 IPR011990 GO:0005515
Mepo2g01990 348 SUPERFAMILY TPR-like 51 238 IPR011990 GO:0005515
Mepo2g01990 348 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 75 109 IPR002885 -
Mepo2g01990 348 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 121 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01990 Mepo-Chr2 28877949 28879365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01990 79 340 Miscellaneous Gene Families AT4G11690 24.074 1.26e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01990 - - psat:127103206 615.92