Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01973 ATGGACACAGAAGCTGAAACTGTGCAGCCTCAGGCTGCACCAGTAAGGGCTCAAAGGAAGAAAATGACGAAACAATTGACGGGGAAACGCGATGATACGCCTTTACATTCTGCAGCAAGAGCCGGGAACATGGCTTCTTTGAAGGATACAGTTGATGGTGCTGAAGAGGGTAAACTGCGCGAAATATTTGCTAAACAGAATCAAGGTGGAGAAACAGCACTTTATGTTGCTGCTGAGTATGGTTATGTTGATATGGTTAGGGAGATGATTCAGTATTATGATCTTGCTGATGCTGGAATTAAAGCAAGAAATGGTTTTGATGCACTTCATATTGCTGCTAAACAAGGGGATTTAGATATTGTAAAGATCCTAATGGAAGCTCATTCTGAATTGTCAATGACTGTGGATCCATCCAACACAACAGCCTTGCACACTGCTGCAACACAAGGACATACTGAGATAGTGAAATATCTATTAGAAGCAGGTAGTAGCTTGGCAACAATTGCTAGAAGTAATGGTAAAACAGCTTTGCATTCTGCTTCAAGAAATGGACATTTGGAGGTTGTGAAAGCGATTCTTGAGAAGGAGCCTGGTGTCGTTACAAGGACTGATAAAAAGGGACAGACGGCACTTCACATGGCTGTGAAGGGGCAGAGTCTTGTGGTAGTAGAGGAGTTGATAAAAGCAGATCCATCAACAATAAACATGATTGATAATAAGGGTAATACAGCGTTGCATATAGCAACCAGGAAGGGAAGAACTCAGATTATCAAGTTGATACTTGGACAAAGTGAAACAAATGGCATGGCAGTAAACAAAAGTGGCGAAACAGCATTAGACACAGCTGAGAAAACAGGAAATTCCGAAGTAAAAATCATTCTTACAGAACATGGTATTCAAAGCAGCAAATCCATAAAATCTCAACCAAAAACAGCTGCAACCAGAGAATTAAAACAGACAGTGAGTGACATAAAGCATGAAGTCCATCACCAACTAGAACACACTCGCCAAACGCGAAGAAGCGTTCAAGGAATCGCAAAACGTCTCAACAAAATGCACACAGAAGGACTCAACAATGCAATAAACTCAACAACCGTCGTCGCGGTCCTCATAGCAACGGTTGCATTCGCAGCCATCTTCACCGTCCCAGGCCAATTCGTGGACGATCCAAAAGAGGTTCCTAAAGGAAAATCCCTTGGTGAAGCAAACATAGCTTCAGAACCCGCGTTTCTAGTATTCATCGTGTTTGATTCAGTCGCGCTTTTCATCTCCCTCGCGGTTGTGGTGGTTCAAACATCAATAGTTGTTATTGAAAGTAAAGCAAAGAAGCAAATGATGGCTATCATTAACAAACTAATGTGGTTGGCTTGTGTGCTTATTTCTGTGTCATTTTTGGCTTTGTCTTTTTTAGTTGTGGGGAAAAAACAAAGGTGGCTTGCAATTGGGGTAACTATTATTGGGACTACCATAATGGCTACAACATTGGGTACTATGAGTTATTGGGTTATTAGGCATAGAATTGAAGCTTCAAGTATACGAAAATCTTCAATGGGAAGTAGGTCAAGGTCTTTTTCAGTTTCAGTTGTTATGTCTGATTCTGAGATATTAAACAATGAGCGTACTAAAATGTATGCTATTTAG 1641 0.4101 MDTEAETVQPQAAPVRAQRKKMTKQLTGKRDDTPLHSAARAGNMASLKDTVDGAEEGKLREIFAKQNQGGETALYVAAEYGYVDMVREMIQYYDLADAGIKARNGFDALHIAAKQGDLDIVKILMEAHSELSMTVDPSNTTALHTAATQGHTEIVKYLLEAGSSLATIARSNGKTALHSASRNGHLEVVKAILEKEPGVVTRTDKKGQTALHMAVKGQSLVVVEELIKADPSTINMIDNKGNTALHIATRKGRTQIIKLILGQSETNGMAVNKSGETALDTAEKTGNSEVKIILTEHGIQSSKSIKSQPKTAATRELKQTVSDIKHEVHHQLEHTRQTRRSVQGIAKRLNKMHTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPKEVPKGKSLGEANIASEPAFLVFIVFDSVALFISLAVVVVQTSIVVIESKAKKQMMAIINKLMWLACVLISVSFLALSFLVVGKKQRWLAIGVTIIGTTIMATTLGTMSYWVIRHRIEASSIRKSSMGSRSRSFSVSVVMSDSEILNNERTKMYAI 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01973 546 ProSiteProfiles Ankyrin repeat profile. 240 261 IPR002110 GO:0005515
Mepo2g01973 546 ProSiteProfiles Ankyrin repeat profile. 138 170 IPR002110 GO:0005515
Mepo2g01973 546 SMART ANK_2a 69 98 IPR002110 GO:0005515
Mepo2g01973 546 SMART ANK_2a 138 167 IPR002110 GO:0005515
Mepo2g01973 546 SMART ANK_2a 274 305 IPR002110 GO:0005515
Mepo2g01973 546 SMART ANK_2a 104 133 IPR002110 GO:0005515
Mepo2g01973 546 SMART ANK_2a 240 273 IPR002110 GO:0005515
Mepo2g01973 546 SMART ANK_2a 30 61 IPR002110 GO:0005515
Mepo2g01973 546 SMART ANK_2a 172 202 IPR002110 GO:0005515
Mepo2g01973 546 SMART ANK_2a 206 236 IPR002110 GO:0005515
Mepo2g01973 546 Gene3D - 9 167 IPR036770 -
Mepo2g01973 546 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Mepo2g01973 546 SUPERFAMILY Ankyrin repeat 34 299 IPR036770 -
Mepo2g01973 546 Pfam Ankyrin repeats (3 copies) 96 165 IPR002110 GO:0005515
Mepo2g01973 546 Pfam Ankyrin repeats (3 copies) 22 92 IPR002110 GO:0005515
Mepo2g01973 546 Pfam Ankyrin repeats (3 copies) 172 231 IPR002110 GO:0005515
Mepo2g01973 546 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 17 524 - -
Mepo2g01973 546 Pfam Ankyrin repeat 241 262 IPR002110 GO:0005515
Mepo2g01973 546 ProSiteProfiles Ankyrin repeat region circular profile. 138 165 - -
Mepo2g01973 546 Pfam Domain of unknown function 355 470 IPR026961 -
Mepo2g01973 546 MobiDBLite consensus disorder prediction 1 48 - -
Mepo2g01973 546 Gene3D - 168 360 IPR036770 -
Mepo2g01973 546 ProSiteProfiles Ankyrin repeat region circular profile. 104 132 - -
Mepo2g01973 546 ProSiteProfiles Ankyrin repeat profile. 104 136 IPR002110 GO:0005515
Mepo2g01973 546 ProSiteProfiles Ankyrin repeat region circular profile. 240 261 - -
Mepo2g01973 546 ProSiteProfiles Ankyrin repeat region circular profile. 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01973 Mepo-Chr2 28705325 28709311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01973 1 546 Miscellaneous Gene Families AT1G07710 69.636 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01973 - - gmx:100809687 830.861