Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01915 ATGTTATCTTTTCGTAGAAATTGCTTGAAATATTTTACCAACTTCAATAGAAGAAACACCTCAAATCAAAATCCATGTTTCCACAAATTTCCTACACTATTTCATCTCAATGACCCAATTCAGAAAAATTCACTTACTTGCTTTAATTATCATCATTATTATTCAACCAAAACCCCTTCAAGATCTTACAGAAGACGAGCTCGAAACCGGTTTTTAAAAGCCAACAAACCTGTTTTAGACCAAGAAAAGTTTCAATTTGCACAATCCCAACTCCTCCCACGGTTTACACCGGAGGAATTACGCGATGTTATTGCGAATCAACGCGACCCGTTAGTTTGTCTGGAGCTTTTTCATTGGGCGTCTCACCAGCCGAGGTTTCGCCATAATGAGTCGAGTTTTCATGTTACCATTAAGAAGCTTGGTGATGCGAAAATGTATCAAGAAATGGATGATATTGTGAATCAATTGCTTGCTGTTCGTTCGATTGGTAATGAGGCATTGTTTAATATGATTATATATTATTTTACTGAGGCGCGGAAGTTGACTCGAGCGGTTATTGTGTTTAAGCATATGAAGAGTAGTAGAAATCCAAATTTTGGGTTTAGGCCTTCGATTAGAACGTATAATATCCTTTTTGGTGCGTTTTTGAGTAGAGGATATAATACTGATATAAACCTTGTGTATATGGAAACTATGCGATGTTTGTTCAGGCAAATGGTAAATGAACATATAGAACCTGATATTTTTTCGTTGAATTCGATGATAAAAGGTTATGTGCTTTCTCTTCATGTTAACGATGCGTTGAGGATATTTCATCAGATGGGCGTGGTTTATGATTGTAAACCGAATTCTTTAACTTATGATTACTTGATTCATGGGCTGTGTGCCAAAGGAAGGACAGAGAATGCTAAAGAATTGTATCATGAAATGAAGGCCAAAGGTTTTGTTCCGAGTAGTAAATCTTATAATTCGCTTGTCAATTCTTTGGCACTCGTTGGAGATGTTGAGGAGGCTGTAAATTATCTATGGGAGATGACTGAAAAGCAAAAATCTGTTGATTTTATTACATACAGGACTGTACTTGATGAGATATGTAGACGGGGAAGAGTTCAGGAGGCCATGAGGTTTCTGCAAGAGTTGCAAGAAAAGGACCTTGTTGATGGGCATACTTATAGGAAGCTTCTTTATGTGCTTGAAGATGATTATGGAGATTCAGAAAACAGAATTGATTCAGGTTCAGCTTTGATCTCACCTTGA 1257 0.3699 MLSFRRNCLKYFTNFNRRNTSNQNPCFHKFPTLFHLNDPIQKNSLTCFNYHHYYSTKTPSRSYRRRARNRFLKANKPVLDQEKFQFAQSQLLPRFTPEELRDVIANQRDPLVCLELFHWASHQPRFRHNESSFHVTIKKLGDAKMYQEMDDIVNQLLAVRSIGNEALFNMIIYYFTEARKLTRAVIVFKHMKSSRNPNFGFRPSIRTYNILFGAFLSRGYNTDINLVYMETMRCLFRQMVNEHIEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYDCKPNSLTYDYLIHGLCAKGRTENAKELYHEMKAKGFVPSSKSYNSLVNSLALVGDVEEAVNYLWEMTEKQKSVDFITYRTVLDEICRRGRVQEAMRFLQELQEKDLVDGHTYRKLLYVLEDDYGDSENRIDSGSALISP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01915 418 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 353 387 IPR002885 -
Mepo2g01915 418 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 283 317 IPR002885 -
Mepo2g01915 418 Gene3D Tetratricopeptide repeat domain 310 408 IPR011990 GO:0005515
Mepo2g01915 418 Gene3D Tetratricopeptide repeat domain 224 309 IPR011990 GO:0005515
Mepo2g01915 418 NCBIfam pentatricopeptide repeat 250 283 IPR002885 -
Mepo2g01915 418 NCBIfam pentatricopeptide repeat 355 385 IPR002885 -
Mepo2g01915 418 NCBIfam pentatricopeptide repeat 286 318 IPR002885 -
Mepo2g01915 418 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 318 352 IPR002885 -
Mepo2g01915 418 Pfam PPR repeat 355 384 IPR002885 -
Mepo2g01915 418 Pfam PPR repeat 250 274 IPR002885 -
Mepo2g01915 418 Pfam PPR repeat family 282 330 IPR002885 -
Mepo2g01915 418 PANTHER ATPASE EXPRESSION PROTEIN 3 25 397 - -
Mepo2g01915 418 Gene3D Tetratricopeptide repeat domain 81 223 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01915 Mepo-Chr2 28012902 28015209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01915 180 395 Glycosyltransferase AT1G05670 25.676 8.23e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01915 - - gmx:102666460 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01915 2 28012902 28015209 Mepo2g01915 2 28012902 28015209 ECH