Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo2g01900 | ATGCAACGCCTCAATTTCCTTGCCAGTGATGCCACCCCTGACGCTCCAGGCGTTGACATCGTGGGAATCCTAAGAAAGGTGAAGTCATTCAACGTCCTAATCCGACTCATGAAAACAACTCAATCAATTAACCAACTAAATTCACAACTATTGACTATAAAATCAGGTGGGCTAACAATTCTTGCACCGGATGACAGCGCCTTCTCAGGACTCAAAGCAGGATTCCTCAACTCTCTTTCCGATGGACAGAAACTCGAGCTGTTACAGTTCCACGTTATTTCAGACTATGTATCTAGCTCTAAATTCGACACATTGACAAACCATGTGAGAACACTTGCTGGAGATCTAAACCCGGAAAGGCATCTTGCTATCTATAAAGTTGGAAAATTACTTCTTCCTATGGATTTCTTTTCAGTTGCTAAGGCACCATCTTTGGCACCGGAACCTTCTGCAATGACTCTGAAAGCTGATAAGGAGAAGGCAGTATCACCAGATTCCTCATATTCATCTCAAGTTAAACCCGCAAACGATAACTCTGGTACTGTGAAAATCAATGCTTATGGAAAGTGGATGACCCTTGTTCTTTGTTTTGGAGCAGTTACCTTAACTTCATTGTCTACATAA | 624 | 0.4215 | MQRLNFLASDATPDAPGVDIVGILRKVKSFNVLIRLMKTTQSINQLNSQLLTIKSGGLTILAPDDSAFSGLKAGFLNSLSDGQKLELLQFHVISDYVSSSKFDTLTNHVRTLAGDLNPERHLAIYKVGKLLLPMDFFSVAKAPSLAPEPSAMTLKADKEKAVSPDSSYSSQVKPANDNSGTVKINAYGKWMTLVLCFGAVTLTSLST | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo2g01900 | 207 | SUPERFAMILY | FAS1 domain | 13 | 133 | IPR036378 | - | |
| Mepo2g01900 | 207 | ProSiteProfiles | FAS1/BIgH3 domain profile. | 17 | 115 | IPR000782 | - | |
| Mepo2g01900 | 207 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 120 | 187 | IPR045003 | - | |
| Mepo2g01900 | 207 | Pfam | Fasciclin domain | 29 | 115 | IPR000782 | - | |
| Mepo2g01900 | 207 | SMART | fasc_3 | 59 | 134 | IPR000782 | - | |
| Mepo2g01900 | 207 | Gene3D | FAS1 domain | 7 | 185 | IPR036378 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo2g01900 | Mepo-Chr2 | 27745612 | 27746719 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo2g01900 | - | - | tpra:123919982 | 283.108 |