Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01711 ATGAATTCTGGAACCATGCAAGACTTTCTGAAAGGAAAGACCATTTTAGTGACTGGCACAACAGGGTTCTTAGCCAAAGTTTTTGTGGAAAAGATATTACGGATTCAACCAGATATACAAAAGCTTTATCTTCTCATAAGAGCTTCAAATACTGAGTTGGCCTCTCATCGCATGCAAAATGAGGTCTTTCAGACAGATTTGTTTCGAGTGCTAAGAGATAAGTTGGGTGGAGGTTTTAATTCATTTATATCAAAGAAGGTTGTAGCAGTAGCAGGAGATGCTGCAGTTGAAAATATGGGAATAAAAGACAATACCATATTAAATGTGATGTTTGAAGAGATAGACTTTATCGTCCATTCCGCTGGAACTACCAATTTTGATGAAAGATTTGACATCTCAATGGGTGTTAATACAATGGGAGCTTTGCATGTCTTAAACATTGCAAAAAAGTGTCGCAAAATGAAGGTCCTTGTCCACATATCTACGGCTTATGTGTGCGGGGAGACTAAGGAAGGAAAGACAATATTTCAAGAGAAACCATTTGAGATGGGTCGTCAATCTCTAGACATACACACAGAAATGGATTTGCTGGAGAAAAAATTAGATGAATTACGAGCAATGAATGTGGATGAAAAAACAATCAAGTATGCGTTGAAAGATTATGGAATTGAAAGAGCAAATTTGCATGGTTGGCCAAACACATATGTATTCACAAAAGCAATGGGAGAGATGCTTTTAGTTCATCATAAAGATAATGTTCCATTGATCATTATACGTCCCACAATGGTAACTAGTACAAGCAAAGATCCGTTTCCTGGTTGGATTGAAGGTCAAAGAACTGTTGATAGTATGATATGTGCCTATGGTAAAGGGAAACTGCCATATTTTCTTGGTAATCCCAGGACAATTTTAGATATCATACCTGCAGATTTGGTCATCAATTGTGTGATTGCAGCCATTGTTGTTAATTCAAATCAAGCTCCTAAAAATTTCATCTACCATGTTTCTTCTTCATTAAGAAATCCTCTCAAAATTTCTGATATCCACAACATTTCCCATAAGTATTTCATGAAAACTCCTTGCCTAGACAAAGATGGAAAGCCAATAGTCATCTCCAAGGGAATTGCCTTGAAAAGTATGGCTGCTTTTAACATTTATACAAAGACCCGATATGTCCTACCACTTGAGGTCTTAAATTTGGTGAACAAACTGATTTGCCATTCCTTCCAAGATGTTTATGATGATAACTACAAGAAAATACGACTGGTGAAGCGACTTGCAAAACTATACAAACCTTACGTGTTTTTCAAAGCAGTCTTTGATGATACGAACACTGAAAATTTAAGGAGGGCAACAGAGGGATATAACATGGAGAATGGAATGCTAGAGTTTGACCCCATTAGCATTAATTGGACAAACTACATGATGAATACGCACATTCCTGGTCTCGTCAAGTATGCAATGAAATAA 1470 0.368 MNSGTMQDFLKGKTILVTGTTGFLAKVFVEKILRIQPDIQKLYLLIRASNTELASHRMQNEVFQTDLFRVLRDKLGGGFNSFISKKVVAVAGDAAVENMGIKDNTILNVMFEEIDFIVHSAGTTNFDERFDISMGVNTMGALHVLNIAKKCRKMKVLVHISTAYVCGETKEGKTIFQEKPFEMGRQSLDIHTEMDLLEKKLDELRAMNVDEKTIKYALKDYGIERANLHGWPNTYVFTKAMGEMLLVHHKDNVPLIIIRPTMVTSTSKDPFPGWIEGQRTVDSMICAYGKGKLPYFLGNPRTILDIIPADLVINCVIAAIVVNSNQAPKNFIYHVSSSLRNPLKISDIHNISHKYFMKTPCLDKDGKPIVISKGIALKSMAAFNIYTKTRYVLPLEVLNLVNKLICHSFQDVYDDNYKKIRLVKRLAKLYKPYVFFKAVFDDTNTENLRRATEGYNMENGMLEFDPISINWTNYMMNTHIPGLVKYAMK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01711 489 Pfam Male sterility protein 17 315 IPR013120 -
Mepo2g01711 489 Coils Coil 194 214 - -
Mepo2g01711 489 CDD FAR_C 390 488 IPR033640 -
Mepo2g01711 489 Gene3D - 4 370 - -
Mepo2g01711 489 CDD FAR-N_SDR_e 13 360 - -
Mepo2g01711 489 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 335 IPR036291 -
Mepo2g01711 489 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 489 IPR026055 GO:0080019
Mepo2g01711 489 Pfam Male sterility protein 391 489 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01711 Mepo-Chr2 25087920 25095056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01711 9 440 Acyl Lipid Metabolism Gene Families AT3G44560 51.136 6.39e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01711 K13356 - pop:7474947 526.554