Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01653 ATGGCTACGCCGTCGAAAAAACCTCGCAACCGCGAAATCCTCTTCGACTCCGTAATCGCTCTCGTCTTCATCCTCGTCGCCTGCGTCGACCTCTGCGACGGCGCCACCGTAGTCGATGTTTACCGTCTTATCCAATACGATATCTCCGGTGTTCCGTTTGGATCTCGTCTCGCTAGCATCAATCACCACGCCGCTTCTCTTCATTTTGCTCCGAGTGCTGATCTCTCTCGTACTGTTCTTCTTATTCCTCTTCGTGAACTCAACATGTCCTTTGTTCAAGAGTATATCGGTGGTAGCAAGCCTCTGGGGGGTTTAATATTTTTGCTGCCCCAGATATTCAGTTTTGAAAACAAAGGTGGTGCGAGTAGTAATCATGATGATGGGAGCAAAGAACCGCTGAAGAATGTGCTGGACGAGCTTGAACAAATACTTATACACACCAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGATGATAACATTGACACTGTGTTATCGGATATCAAGAAGAATGATGCCTCTGGTCAGCCTGCTACTGCAACTACTGGCGGGTACAAGTTTGTAGTTTCAGCCACTGAACCAAAGAAAGTTGGATCTCCACCCATTACAAATATTCAGGGATGGTTGCCAGGGCTGAAGACAGATGGTGATTCTCATCAATTACCCACCATTGCGATAGTGGCATCATATGACACCTTTGGGGCTGCTCCGGCATTATCAGTGGGAAGCGATAGCAATGGAAGTGGCATTGTGGCTCTTCTTGAAGTAGCTAGATTATTTTCTCTTTTATATTCGAATCCGAAGACAAGAGGACAGTACAATCTTCTGTTTGGGCTAACTTCTGGTGGGCCTTACAACTACAATGGAACCCGTAAGTGGCTTCAGAGCTTTGATCAACGTCTGCGCGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCATGGGAAAATGATCTATGGATTCACGTGTCAAAACCTCCAGAAAATGCCTTTATTAAACAAATTCTAGAAGATTTTTCAAGTGTTGCAGAAGATTTAGGTTTCCAAGTTAATCTGAAGCATAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACCCTTTCTGAACTCCCTACGGCACCTGAATTGCTACAGAGCACCGGTGGATTGGTTGATGGCAGGCAATTTGTCAATGAAGCAGCAATTGTCAGAAGTGCGAAACTAATTGCTGAGTCTCTTGCGAAGCATATTTATGGACATCAAGGAAAGAACGTACAGATCTTTGCGGACAACAGCAATTTGGCTGTAAATCCTTCTTATATTCGATCATGGTTAGATGTTTTGTCCCGAACACCTCGAGTAGCACCATTTTTATCAAAGGACGATCCTTTTATTACGGCATTGAAAAAGGAATTAGAAGATCATACCGATGAAGTTAATCTACAACGAGAAGTGCTAGATGGGATGTTCACTTTCTATGATTCAACCACAGCACAGCTGAACATATATCAGGTTGCCAGTGTCACGTTTGACTTGCTGTTGCTTCTAGTGTTGGGATCATATTTAATTGTGCTCTTCAGTTTCTTGGTCATCACTACGAGGGGTCTTGATGATCTAATCAGTTTATTTCGGCGGCCTCCTTCACGAAAAATGAAGACTGCATAA 1695 0.4342 MATPSKKPRNREILFDSVIALVFILVACVDLCDGATVVDVYRLIQYDISGVPFGSRLASINHHAASLHFAPSADLSRTVLLIPLRELNMSFVQEYIGGSKPLGGLIFLLPQIFSFENKGGASSNHDDGSKEPLKNVLDELEQILIHTNLPYPVYFAFEDDNIDTVLSDIKKNDASGQPATATTGGYKFVVSATEPKKVGSPPITNIQGWLPGLKTDGDSHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLQSFDQRLRESIDYAICLDSIGSWENDLWIHVSKPPENAFIKQILEDFSSVAEDLGFQVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELPTAPELLQSTGGLVDGRQFVNEAAIVRSAKLIAESLAKHIYGHQGKNVQIFADNSNLAVNPSYIRSWLDVLSRTPRVAPFLSKDDPFITALKKELEDHTDEVNLQREVLDGMFTFYDSTTAQLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKMKTA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01653 564 SUPERFAMILY Zn-dependent exopeptidases 149 387 - -
Mepo2g01653 564 Coils Coil 475 495 - -
Mepo2g01653 564 CDD M28_nicalin_like 137 430 - -
Mepo2g01653 564 Pfam Nicastrin 225 362 - -
Mepo2g01653 564 PIRSF Nicalin 4 559 IPR016574 GO:0009966|GO:0016020
Mepo2g01653 564 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Mepo2g01653 564 Gene3D Zn peptidases 135 397 - -
Mepo2g01653 564 PANTHER NICALIN 14 564 IPR016574 GO:0009966|GO:0016020
Mepo2g01653 564 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01653 1 562 EF-hand Containing Proteins AT3G44330 73.721 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01653 K26499 - gmx:100779713 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01653 2 24421691 24431193 Mepo2g01653 2 24421691 24431193 ECH