Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01504 ATGTCAGACTTTTGTCTAAAAAATGGTCACTCCTTCGCGCTGCGAAGGAGGCTTCACAGCCGCGTATCGTTGCTCCGGAGATGTATTCTTCGAGCTCTACACCGACTGCTTGCCTGCTCTGGCAAGCAGCCTGGTGCTAATGCTACATACAGCATGTTAACTCCGCATTCAGCATTGCCATCTCCACGGGCTTCGTTGTTGGATTCCACCGTCGAAACTGCTCTGCAACCACCTGTTTTTCACACAAATGAATTGGACACTGATTTGGTTTCACTCAAAATTAGTTTGTTGGGTGATTGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGAATGAAAGAGAGCAAGGAGGGGAACAGAGGAAAGGACCAAATCAAATGGACAAAACATTGGTTGTGAGTGGAGCACGTATATCCTATCGTATCTGGGAAGTACAAGGGGATGGAAAATCAGAAAACCAGCTTCCAATGGCATGTAAGGACTCAGTGGCAATTTTGATCATGTTTGATCTTACAAGTCGATGCACATTAAACAGTGTTCTGGGATGGTACAAAGAAGCAAGGAAATGGAATCAGACGGCAATTCCGGTGTTGATAGGAACCAAGTTTGATGATTTCATTCAGCTCCCTATTGATATGCAATGGACCATCGCTAGTGAGGCAAGAACATATGCAAAGGCATTGAATGCCACTTTGTTCTTTTCAAGTGCAACATACAACATCAATGTCAACAAGATCTTCAAGTTCATCACTGCAAAACTCTTTGACTTACCTTGGACAGTGGAAAGGAATCTAAATGTTGGAGAACCCATCATTGATTTCTGA 831 0.4332 MSDFCLKNGHSFALRRRLHSRVSLLRRCILRALHRLLACSGKQPGANATYSMLTPHSALPSPRASLLDSTVETALQPPVFHTNELDTDLVSLKISLLGDCQIGKTSFLVKYVGNEREQGGEQRKGPNQMDKTLVVSGARISYRIWEVQGDGKSENQLPMACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01504 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 269 IPR027417 -
Mepo2g01504 276 SMART rab_sub_5 92 259 - -
Mepo2g01504 276 Gene3D - 82 267 IPR027417 -
Mepo2g01504 276 SMART rho_sub_3 94 258 IPR001806 GO:0003924|GO:0005525
Mepo2g01504 276 Pfam Ras family 93 256 IPR001806 GO:0003924|GO:0005525
Mepo2g01504 276 CDD Spg1 92 273 IPR017231 -
Mepo2g01504 276 PRINTS Transforming protein P21 ras signature 92 113 - -
Mepo2g01504 276 PRINTS Transforming protein P21 ras signature 133 155 - -
Mepo2g01504 276 PRINTS Transforming protein P21 ras signature 194 207 - -
Mepo2g01504 276 PRINTS Transforming protein P21 ras signature 234 256 - -
Mepo2g01504 276 FunFam Septum-promoting GTP-binding protein 1 82 266 - -
Mepo2g01504 276 PIRSF GTPase_Tem1 4 276 IPR017231 -
Mepo2g01504 276 ProSiteProfiles small GTPase Rab1 family profile. 86 276 - -
Mepo2g01504 276 PANTHER - 89 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01504 Mepo-Chr2 22367249 22371001 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01504 K07976 - gmx:100792211 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01504 2 22367249 22371001 Mepo2g01504 2 22367249 22371001 ECH