Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01412 ATGATGCAATTACATGCAATGGTAACAAGATCTGCAAAACGTAAAAAGATAGCTCAAATAGAACAAGAACAAGAAAACAATGCCAAATCAAAACCATTGATAGATCGAATTAGCGATCTCCCTGATGATATTATTCATCAAATCCTTCTTTTACTTCCCATTAAATGTGTTGCACAAATGAGTGTTCTTTCAAAGAGATGGAAATTTCTTTGGACATCTTTTCCTGATCTTGATTTCACAACCCTTGATCCATTTCCTCTTATTTCAACCAAAAATCATAAGAACATTGATATATCAAGACACCCTTTATCTTCTTCAAAACTTGATTTCATCACACAAGTTCTTTCTATTCGCGACGTAAAACATAAAGACATAAGGGTCCTTTGTTTTCGCGCATCTTTGAGTTTTTCTCGTTTAAATAATTTGGTTCGTAATGCCATTAGGCATAATGTTAGAGAACTTGATATTGAAGTTCACACAGAAGTAGATACAGAAGATTTTTTCAACTTTCCTAGATGTGTTATTGGTAGTGAATCATTAAGAGTTTTGAAATTGAAATCCGGTTTTCGTTTGCCTCCATCATCGGTTATGCGAAACGGATTTCAATCTTTGCATACATTGTCACTATCTCTAGTTATTTTATATAACCAGCCTTCTTTATCTGATCTATTCAGTGAATCATCTTTTCCTCTTCTAAAAAATTTGCACCTTGATATGTGTTTCGGATTAACACATCTTCGTATTGGTTGTCGCGCTCTCGAAGATTTGAATTTGGAAAGATGTTATGAGCTACAAGGTTTGGAAATTTGTGGTGCAAAAATTGAAACATTGAGAGTAGTAAGTTGTTTTGATGCTTATTGTGACAACACTTGGGTGAGATTGAATGTGCCAAAGCTTGAAAATTTGATTTGGAAATTTAATGCAGTTACTGATGTCACTGTATTTGAGAATTCAAATTTGTTGAATGAGGCTTCTATTGGTTTCTTTATGTTGAGAGAAGGTAAGGTTAATATGGGTAGGTTTGAAAGTGCCAATAACTTCTTCTCTGGATTGTCTCATGCTCATTCCTTGACTCTTAATAGCCAAACTATTGAGATTCTATCAAAGTATAAATTTTTTATTCAACCATTTTATAATCTTAAATCATTAGAGCTACATACTAGTTTGAACAAGAGTAATGTTCAAGCATTAGCATGCCTATTCAGGAGCTGTCCAACCCTCCACACATTTATTCTGGAGATCATTAACGATTACAAGATTGAAAGAAAACTATGGAATAGGGACTTATGGGACATGACTAGCACAGAGGAAGAGCAGTATTGGGAATCTCAAATCCCATTCTTGAAATCTTTTCTACAACACTTGAAAGTGGTGAAATTTAAAGGCTTTCTTGATTGTGCAAATGAAGTTACATTAGTAAAGTTTCTTCTCAAGCATGGAAAGGGTTTGGAAGAAATGAGATTGTGCACAGGACACTCAAATAGAAGAGATACTTTGAGGAGACAAAAGATAAGGTCACAAATGATGGGATTTTCTAGGGCTTCTTCTAATGCCAAAGTGGAGTTTCAGTAG 1572 0.3429 MMQLHAMVTRSAKRKKIAQIEQEQENNAKSKPLIDRISDLPDDIIHQILLLLPIKCVAQMSVLSKRWKFLWTSFPDLDFTTLDPFPLISTKNHKNIDISRHPLSSSKLDFITQVLSIRDVKHKDIRVLCFRASLSFSRLNNLVRNAIRHNVRELDIEVHTEVDTEDFFNFPRCVIGSESLRVLKLKSGFRLPPSSVMRNGFQSLHTLSLSLVILYNQPSLSDLFSESSFPLLKNLHLDMCFGLTHLRIGCRALEDLNLERCYELQGLEICGAKIETLRVVSCFDAYCDNTWVRLNVPKLENLIWKFNAVTDVTVFENSNLLNEASIGFFMLREGKVNMGRFESANNFFSGLSHAHSLTLNSQTIEILSKYKFFIQPFYNLKSLELHTSLNKSNVQALACLFRSCPTLHTFILEIINDYKIERKLWNRDLWDMTSTEEEQYWESQIPFLKSFLQHLKVVKFKGFLDCANEVTLVKFLLKHGKGLEEMRLCTGHSNRRDTLRRQKIRSQMMGFSRASSNAKVEFQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01412 523 ProSiteProfiles F-box domain profile. 34 82 IPR001810 GO:0005515
Mepo2g01412 523 SMART 9598neu4hmm 449 523 IPR006566 -
Mepo2g01412 523 Pfam F-box domain 37 73 IPR001810 GO:0005515
Mepo2g01412 523 CDD F-box_AtFBL13-like 37 72 - -
Mepo2g01412 523 Gene3D Ribonuclease Inhibitor 33 321 IPR032675 -
Mepo2g01412 523 SUPERFAMILY F-box domain 34 88 IPR036047 GO:0005515
Mepo2g01412 523 SUPERFAMILY RNI-like 91 417 - -
Mepo2g01412 523 SMART fbox_2 40 81 IPR001810 GO:0005515
Mepo2g01412 523 Pfam FBD 449 488 IPR006566 -
Mepo2g01412 523 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 35 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01412 Mepo-Chr2 20712973 20715011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01412 35 469 EF-hand Containing Proteins AT5G41840 23.077 2.79e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01412 - - adu:107477862 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01412 2 20712973 20715011 Mepo2g01412 2 20712973 20715011 ECH