Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01403 ATGGGTTCCAATGGTTTTGAAGACTTGTTACCAGTGATGGCAAACAAGCTAGGAGGTGAGGGTTTGATAAAGGAGCTATGCAATGGGTTTGAATTGTTGATGGACAAAGAAAAAGGTGTGATAACATTGGATAGTTTGAGGAAAAACGCTGCTGTTTTGGGTCTACAAGATTTGAAGGAAGATGAACTTGTTGGTATGATGAATGAAGGTGATTTAGATAGAGATGGAGCACTTACTCAGATGGAGTTTTGTGTTTTGATGTTTAGGTTGAGTCCTGAATTGATGGAAGAGTCTTGGTTTTGGCTTGAGGAAGCTCTTCAACATGAACTTGGTGACAATAATAATAGTAACTGTTCTTTGTAG 363 0.3857 MGSNGFEDLLPVMANKLGGEGLIKELCNGFELLMDKEKGVITLDSLRKNAAVLGLQDLKEDELVGMMNEGDLDRDGALTQMEFCVLMFRLSPELMEESWFWLEEALQHELGDNNNSNCSL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01403 120 ProSiteProfiles EF-hand calcium-binding domain profile. 58 93 IPR002048 GO:0005509
Mepo2g01403 120 ProSitePatterns EF-hand calcium-binding domain. 71 83 IPR018247 -
Mepo2g01403 120 PANTHER CALCIUM-BINDING PROTEIN KIC 4 111 IPR044205 GO:0005509
Mepo2g01403 120 SUPERFAMILY EF-hand 21 99 IPR011992 -
Mepo2g01403 120 Gene3D - 4 119 - -
Mepo2g01403 120 Pfam EF-hand domain pair 37 89 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01403 Mepo-Chr2 20550268 20550886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01403 6 110 EF-hand Containing Proteins AT5G54490 66.981 3.81e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01403 K24345 - gmx:100527206 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01403 2 20550268 20550886 Mepo2g01403 2 20550268 20550886 ECH