Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01398 ATGTTTAAATTTTCTTGTTTCTATATTAAATCCCAAGGCAACAAGACAAAGAAATTAGCTCAACCTTCAACTGAAGCAATGGCAAAAGCTTTGAGAGATAGTTCCAAAAATCCAGTTGGTAAAGATTCGCCTATCCCTACAGGCTTAAATTCATCAGTTTCAAAACAGCAACCACGTAAACTAATGAATGTCTCTGAGAATGATATTCTCGACCAGGTTTCAGTTGAGCACATTGGTAGATTAGAGGATTTCAATAGTAAGTTGTGCATTGAATTCGACAAAAAAGTTCGCCAAACTGGACGTATGAGGAAAAGTCAGTCGGAAAATGTGCTTTGTCAAGGCATAACCGAGGGTGATCAAGATCTGGGGTTTTCCAAAAGCCGCTATGACTCACCAAATTCAATTGGCAGCTCTAATGATCAATCCAAAACGATTTCCAGCTTTGGGTTTCAAGTCATTCCTAGCTGTGACAATGAAGGCTCACTTTTTTCAATAGGAGATCGGACACCTTCCGATAAAGATGCTCGTGAAAATTCTGATACTCCACTATCAGGTGATCATGCCGGTGGCTCTGCTGGCTCTGCTGGCTCTGCTTACCAGACTTCTGGTCCCAGTACGCCAACTTTAAGAAAGTCACGTTCTTTGCCAAATATCAAAGCTTCTACACTTTCTTCCACAAATAACCAGGCTTTTAAACATGCATCTTCAATTTCAAGATCTTCTGATGATCTTTGTGCTTTAGGCTTAAGGAAGAAAGATGTGTTCATCAATGTGTCTTATGATCAAATAGGGGAAACTCAAGAAAGAGAAAGTGGCATGGAAAAAACTGATAATCATATAGACAGATACTTCGATGATGGTTTTGATTCTCATCTACTTTCCGGCTTACAAAAGGACTGGACAATGCCAATTACAGATGATATAAGTGATGCCGAACCCCTTCAAGGAGATTCCTCGAGTGAGTTTCCTAACAAAGATTTTAAGGTTAAGCGGATTGAGGATTGGGTGATCGGTCTGCAGCATTGTGGACCTCCTCTCGAGGATATAACTGAATTGCCCGAATCTGTTGATCCTAAAGTTGATATTAACACCGCAAATGCCGCCGTGGCTGCCTCAGTTGTGGATCATAAGATCACTCCAGGAATGGAAACAGCTAAAAGATATATATCTTCTTTAACTGCAAATGCCACTGCAGCTCAGCTGGCGAATCATGGGTTGGCTGTGATTCCCTTTTTGAGTGCATTTGTGAGTTTGAAGGTGCTCAATTTGTCTGGAAATGCAATCGTAAGGATAACTGCTGGCACTCTTCCTCGAGGACTTCACACATTAAATTTGTCAAAAAACAATATCTCCACTATAGAGGGATTACGTGAACTTACTCGGCTTCGTGTGCTAGACCTCAGCTACAACCGTATACTAAGAATTGGACACGGTCTGGCGTCCTGTTCTTCTCTAAAGGAGCTGTACCTGGCTGGAAATAAGATTGGTGAAGTCGAGGGTCTGCACCGCCTGTTGAAACTAAGCATCCTGGATATCCGTTTTAACAAGATTTCAACTGCCAAATGTCTTGGACAACTTGCAGCCAACTATAATTCTTTGCTAGCCATCAACTTGGAAGGGAACCCTTGCCAGAAAAATGTTGGAGATGAACAAATTAAGAAATATCTGCAAAGCCTTCTTCCCCATCTTGTCTACTACAATAGGCAGCCATTCAAAGCAAACGGTTTGAAAGACGGTGCGGATCGTGCAGTTCGATTAGGAATGAATTCACAACAGTTTGATCGCAATCTTAGAGTCGATCGTAAGTCTACAAGGAAGGGGCCATCATCTACTCGGAGGTCATCTGCTGTGTCCTCACCAAAACTGTCCAAAGGAAAGCAAGCCCAGCTCCCACCAATCAGAACCAAAACATCAACCCAAAGTCGCCATCATTTTGATTCTCCCAGCAAACCGTTGAACTTGAATTCAGGGCACTTCATGCGCAAGAGTCGCAGCGAGAGTACTCTTCTTGGAGCTTTGTAA 2022 0.4228 MFKFSCFYIKSQGNKTKKLAQPSTEAMAKALRDSSKNPVGKDSPIPTGLNSSVSKQQPRKLMNVSENDILDQVSVEHIGRLEDFNSKLCIEFDKKVRQTGRMRKSQSENVLCQGITEGDQDLGFSKSRYDSPNSIGSSNDQSKTISSFGFQVIPSCDNEGSLFSIGDRTPSDKDARENSDTPLSGDHAGGSAGSAGSAYQTSGPSTPTLRKSRSLPNIKASTLSSTNNQAFKHASSISRSSDDLCALGLRKKDVFINVSYDQIGETQERESGMEKTDNHIDRYFDDGFDSHLLSGLQKDWTMPITDDISDAEPLQGDSSSEFPNKDFKVKRIEDWVIGLQHCGPPLEDITELPESVDPKVDINTANAAVAASVVDHKITPGMETAKRYISSLTANATAAQLANHGLAVIPFLSAFVSLKVLNLSGNAIVRITAGTLPRGLHTLNLSKNNISTIEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKIGEVEGLHRLLKLSILDIRFNKISTAKCLGQLAANYNSLLAINLEGNPCQKNVGDEQIKKYLQSLLPHLVYYNRQPFKANGLKDGADRAVRLGMNSQQFDRNLRVDRKSTRKGPSSTRRSSAVSSPKLSKGKQAQLPPIRTKTSTQSRHHFDSPSKPLNLNSGHFMRKSRSESTLLGAL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01398 673 Pfam Leucine rich repeat 417 472 IPR001611 GO:0005515
Mepo2g01398 673 Gene3D Ribonuclease Inhibitor 364 559 IPR032675 -
Mepo2g01398 673 MobiDBLite consensus disorder prediction 591 673 - -
Mepo2g01398 673 SUPERFAMILY Outer arm dynein light chain 1 409 570 - -
Mepo2g01398 673 PANTHER NISCHARIN RELATED 207 666 - -
Mepo2g01398 673 MobiDBLite consensus disorder prediction 194 213 - -
Mepo2g01398 673 MobiDBLite consensus disorder prediction 609 663 - -
Mepo2g01398 673 FunFam Protein phosphatase 1 regulatory subunit pprA 376 557 - -
Mepo2g01398 673 MobiDBLite consensus disorder prediction 18 57 - -
Mepo2g01398 673 SMART LRR_sd22_2 437 458 - -
Mepo2g01398 673 SMART LRR_sd22_2 504 528 - -
Mepo2g01398 673 SMART LRR_sd22_2 459 481 - -
Mepo2g01398 673 SMART LRR_sd22_2 482 503 - -
Mepo2g01398 673 ProSiteProfiles Leucine-rich repeat profile. 439 460 IPR001611 GO:0005515
Mepo2g01398 673 MobiDBLite consensus disorder prediction 126 141 - -
Mepo2g01398 673 SMART LRR_typ_2 415 438 IPR003591 -
Mepo2g01398 673 SMART LRR_typ_2 459 482 IPR003591 -
Mepo2g01398 673 MobiDBLite consensus disorder prediction 40 57 - -
Mepo2g01398 673 MobiDBLite consensus disorder prediction 161 213 - -
Mepo2g01398 673 ProSiteProfiles Leucine-rich repeat profile. 461 483 IPR001611 GO:0005515
Mepo2g01398 673 MobiDBLite consensus disorder prediction 121 141 - -
Mepo2g01398 673 Pfam Leucine Rich repeat 481 496 IPR001611 GO:0005515
Mepo2g01398 673 ProSiteProfiles Leucine-rich repeat profile. 484 505 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01398 Mepo-Chr2 20481533 20485525 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01398 - - gmx:100778703 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01398 2 20481533 20485525 Mepo2g01398 2 20481533 20485525 ECH