Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01338 ATGGAAACCCAAAACAACAACGGGTCGGAACCTGACCCGAGCCTTGTTACGGCGGAGACACCGGAACTAATGCCTCAAAATCTTGTTAACAACAACCCTGTTGCGGCGGAGACATCTAAGCCACAGCCTGAAAAGCTTAGCAACAACAACGGGTCAGAACTTGACCCAAACCCTTTTGCGGCGGAGTCACCGGTGGCCGAAAAGCTTGGTACTTCGGATGGTGAAATTTCTATTGAGAAATCCGTGGAAAGGATCACGTTAACGGGTGACCCTCCTTCAGTTGAGGGTGAAGGTGAAGGTGAAAGTGAAAGTTCAGAGTCTGAATCTGAGAGTTCTACTTCTTCATCGTCATCATCGTCGACGTCTGGTTCTGACAGTGATGAAGACGACGACGATGATGCTGAAGAAGAAGAAGAAGGGGAGATAAGTGATGATGAGAAGATGGTTAGTTGGAGTGCGGCTGACGGTGATCTTGATGATGAAGATGTTGTAGTAGGACCAATTAGGTCAAAGAATGAGATTCAGAATTTGCCTCCAGTTCCTCCGGTGGATGTGTCTTTAGCACCGCACCATAAAATGCTACCTGTGGGAGTTGTTATGTCGACTCTTGGAGCTCAAGTCATTGTGGAAGGAGTGGAGAAACATGAACCTCTTAATGAAGGTTCTGTTTTGTGGCTGACTGAAAGCCGCAAACCACTAGGTTTAGTTGATGAAATCTTTGGACCAGTCAAAAACCCGTATTATGTTGTGAGATACAATTCTGAAAATGATGTCCCTGCGGGGATCCAAGGGGGAACAACTTTGGTCTCATGTGTTCCAGAATTTGCTGAACATGTGCTCAATAATAAGGATCTTTACAGGAAAGGCTATGATGCATCTGGTGCGTATGATGAAGAGTTGTCTGATGAAGTAGAGTTTTCAGATGATGAGAAAGAGGCTGAATACAGGAAAATGCAAAAAATGACAAAGAGAGGGGTAAATGACCAAAATCCTGGCAAGAAGAAAAACAATAAAAAGAAATTTTCACCGAAAGAGCATGTGTTACCTCCTAATGCATCTGTAGCATCACCACATGTGTTTCCCAACGTCCCTAACGCACCTGCAGCAGCACCATTTGTTAATAAAGGAAACTATTCTCCTTTTTCAGGCATTGGACAAGGTGGAACTACCACAGTTTCTCCATTTCAACCTTTAAATGCAGGTCCTAACTTTGCTGCAAATTCATTGTGGACAAATCAGACAACATTTCCACAGCAGCCACAGCCCTCCCTGCCTCCAAACGCATTTCCTTCAAATGCCATGTCATATTATCCACAAAACACACAATTTTCTCATCAGTTTCCTGTTCCAGGAATTCCATTTCAACAGCAAATGAATCCCAGTCACGGAACTCATTTCCCAACTATGATGCCTGGGGTACAGCCCAATATATTTTCACAACAACCCATGTATGCACCAGGGTTCGTGGGTCAAAACCAAATGCCACAACAATCCTTCCAACAGATTCAGCAACCACCTATCTTTCAAGCGCAGCAACAGGGTTTTCCACCCACTGAATTGCAGCAGCCAGAAAGAAACTTTAACTTGCGTCCGAGTGGCAACCCCTCTCAATTTCATCCAGGTTCATCAGGTAGTCGAGGGAGACCATCATTTCGTGGTGCTGGTAGGAGAGGGTGGCAACCTTCAAGGTGA 1692 0.4498 METQNNNGSEPDPSLVTAETPELMPQNLVNNNPVAAETSKPQPEKLSNNNGSELDPNPFAAESPVAEKLGTSDGEISIEKSVERITLTGDPPSVEGEGEGESESSESESESSTSSSSSSSTSGSDSDEDDDDDAEEEEEGEISDDEKMVSWSAADGDLDDEDVVVGPIRSKNEIQNLPPVPPVDVSLAPHHKMLPVGVVMSTLGAQVIVEGVEKHEPLNEGSVLWLTESRKPLGLVDEIFGPVKNPYYVVRYNSENDVPAGIQGGTTLVSCVPEFAEHVLNNKDLYRKGYDASGAYDEELSDEVEFSDDEKEAEYRKMQKMTKRGVNDQNPGKKKNNKKKFSPKEHVLPPNASVASPHVFPNVPNAPAAAPFVNKGNYSPFSGIGQGGTTTVSPFQPLNAGPNFAANSLWTNQTTFPQQPQPSLPPNAFPSNAMSYYPQNTQFSHQFPVPGIPFQQQMNPSHGTHFPTMMPGVQPNIFSQQPMYAPGFVGQNQMPQQSFQQIQQPPIFQAQQQGFPPTELQQPERNFNLRPSGNPSQFHPGSSGSRGRPSFRGAGRRGWQPSR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01338 563 Gene3D Probable tRNA pseudouridine synthase domain 165 269 IPR038664 -
Mepo2g01338 563 MobiDBLite consensus disorder prediction 511 544 - -
Mepo2g01338 563 MobiDBLite consensus disorder prediction 124 144 - -
Mepo2g01338 563 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 165 271 - -
Mepo2g01338 563 MobiDBLite consensus disorder prediction 298 353 - -
Mepo2g01338 563 Pfam Gar1/Naf1 RNA binding region 194 260 IPR007504 GO:0001522|GO:0042254
Mepo2g01338 563 MobiDBLite consensus disorder prediction 1 150 - -
Mepo2g01338 563 MobiDBLite consensus disorder prediction 310 335 - -
Mepo2g01338 563 MobiDBLite consensus disorder prediction 1 56 - -
Mepo2g01338 563 MobiDBLite consensus disorder prediction 107 123 - -
Mepo2g01338 563 SUPERFAMILY Translation proteins 193 256 IPR009000 -
Mepo2g01338 563 MobiDBLite consensus disorder prediction 511 563 - -
Mepo2g01338 563 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 33 503 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01338 Mepo-Chr2 19472057 19476291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01338 K14763 - gmx:102661630 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01338 2 19472057 19476291 Mepo2g01338 2 19472057 19476291 ECH