Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00634 ATGTCACCATGTGTGAAGAGATTGGGAAAATGGGTGTCTTTGGTTTCAAGGAGGGGTTTGTCAACTTCCATTGTTCAGAAGGATGCTGCTGCTGAGAATGGTGTTAAATCATTGAACCTTTATTCTGCTATTAATCAAGCTCTTCATATTGCTTTGGACACTGATCCTCGTGCTTATGTTTTCGGAGAAGATGTAGGCTTTGGTGGCGTTTTCCGTTGCACAACTGGATTAGCAGACCGATTTGGTAAAAATCGGGTTTTCAATACTCCTCTCTGTGAGCAGGGTATCGTTGGCTTTGGAATTGGTCTGGCAGCTATGGGAAATCGAGCCATAGCTGAAATCCAGTTTGCAGATTACATTTTTCCTGCTTTTGATCAGATTGTCAACGAAGCTGCTAAGTTTAGATACCGGAGTGGAAACCAATTTAATTGTGGCGGTTTAACAATTAGAACCCCTTATGGAGCTGTTGGCCATGGTGGACATTACCACTCTCAATCTCCTGAGGCTTTCTTCTGTCATGTTCCTGGTATCAAAGTCGTCATTCCTCGAAGTCCAAAGGAAGCGAAAGGGTTATTGTTATCTTGCATACGAGATCCAAATCCTATTGTATTTTTTGAACCAAAGTGGCTTTATCGTTTGGCCGTTGAAGAAGTACCAGAGGGTGATTACATGTTGCCTTTATCTGAGGCCGAGGTGATTCGAGAAGGAAGCGATATTACACTTGTTGGATGGGGAGCTCAATTGTCTATAATGGAACAAGCCTGTGTTGATGCTGAAAAAGAGGGAATTTCTTGTGAATTGATAGATCTGAAGACACTAATTCCTTGGGATAAAGAAACTGTGGAGGCATCAGTAAAAAAGACAGGAAGACTTCTTATTAGTCATGAAGCTCCGGTGACCGGAGGTTTTGGTGCTGAAATCTCAGCTTCCATTCTTGAACGCTGCTTCTCAAGGTTAGAGGCACCAGTAGCAAGAGTTTGTGGCCTAGACACTCCTTTTCCTCTGGTTTTTGAACCCTTCTACATGCCAACCAAGAATAAGATATTGGATGCAATTAAATCAACTGTCAGCTACTAA 1077 0.4243 MSPCVKRLGKWVSLVSRRGLSTSIVQKDAAAENGVKSLNLYSAINQALHIALDTDPRAYVFGEDVGFGGVFRCTTGLADRFGKNRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPKEAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEGDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLLISHEAPVTGGFGAEISASILERCFSRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVSY 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00634 358 CDD TPP_PYR_E1-PDHc-beta_like 43 208 - -
Mepo2g00634 358 Gene3D - 227 357 IPR009014 GO:0003824
Mepo2g00634 358 Gene3D - 35 226 - -
Mepo2g00634 358 FunFam Pyruvate dehydrogenase E1 beta subunit 35 226 - -
Mepo2g00634 358 FunFam 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial 227 358 - -
Mepo2g00634 358 Pfam Transketolase, C-terminal domain 229 348 IPR033248 -
Mepo2g00634 358 SUPERFAMILY TK C-terminal domain-like 222 357 IPR009014 GO:0003824
Mepo2g00634 358 SMART Transket_pyr_3 38 213 IPR005475 -
Mepo2g00634 358 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 37 238 IPR029061 -
Mepo2g00634 358 Pfam Transketolase, pyrimidine binding domain 39 212 IPR005475 -
Mepo2g00634 358 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED 22 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00634 Mepo-Chr2 7538831 7544783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00634 21 358 Acyl Lipid Metabolism Gene Families AT1G55510 90.533 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00634 K00167 - gmx:100802853 642.499