Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00345 ATGCAAAGATTTCATCTGGGTTTCTCTCAAATTCCAAACTTGATGATGGATTCTTCTTCATTATCTCCTTTGTCTCTTCAAACTCAAAAATCACCTTTTCAAAACTTACCTGAAGAATCCTCACCAAAACAAACCAAAAAAAGCTTACTTTCATCTCTAATGGGTGCTAGTAACAACAACACTTCTTCAAACCTTAGAACCCCTTCTTTTGAAGAAGATAACTACTTTGTTACCCTTCTCAAATCCTCAGAGAAAAAAGCACTTCAAGACCTCAAAAAAACCCTCCTTGAAGTCACAAATGAAAAAAACTCTTCCAATGGTGAAGTTTCCATGTGGGGTATTCCACTTCTTGGTGGAGATGACAGAGCTGATGTAATCCTCTTGAAGTTTCTTAGAGCAAGAGATTTCAGAGTTAATGAAGCATTAAACATGATTACAAAGTGTTTAGCTTGGAGAAAAGAGTTTAATGCTGACACAATAGTTGAAGAAGATTTGAGTCAGTTCAAAGAGCTTGAAGGTGTTATAGCTTATATGCAAGGCTATGACAAAGAGGGTCATCCTGTTTGTTACAATGCTTATGGTTTGTTTAGAGATAAAGATATGTATGAGAGGATTTTTGGTGATGAAGAGAAGCTTAAGAAGTTTCTTAGGTGGAGAGTTCAAGTTCTTGAAAGAGGTATTAGGCTTCTTCATTTTAAACCTGGTGGTGTTAATTCTCTTATTCAAGTTACTGATCTTAAAGATATGCCTAAAAGAGAATTAAGGGTTGCTTCTAACCATATTCTCTCACTCTTTCAAGATAACTACCCAGAAATGGTTGCAAGAAAGATTTTCATCAATGTGCCATGGTACTTCAGTATGTTGTATTCAATGTTTAGTCCATTTTTGACACAAAGGACTAAGAGCAAGTTTGTGATCTCTAAGGAAGGAAATGCTGCTGAGACACTCTACAAATTCATTAGACCTGAGGATATTCCTGTTCAGTATGGAGGGCTGAGTTTGCCAACTGATTTGCAAAATGGTCCCCCAAAACCAGCTTCTGAATTCACTGTCAAAGGAGGGGAGAAAGTGAATATACAAATAGAAGGAATTGAGGGAGGTGCAACTATCACTTGGGACATTGTTGTTGGAGGCTGGGACTTAGAATACAGTGCTGAGTTTGTCCCTAATGCTGAAGGTAGCTACACCATAGCAGTTGAGAAGCCAAGGAAGATCGGTGCCTCAGAAGAAGCAATCCACAACTCATTCACATCGAAAGAATCCGGCAAAATGATACTCTCAGTGGACAACACTGCCTCAAGGAAGAAAAAAGTTGCTGCATATCGTTATGTTGTCCGAAAATGTGCCACCACTTGA 1356 0.3827 MQRFHLGFSQIPNLMMDSSSLSPLSLQTQKSPFQNLPEESSPKQTKKSLLSSLMGASNNNTSSNLRTPSFEEDNYFVTLLKSSEKKALQDLKKTLLEVTNEKNSSNGEVSMWGIPLLGGDDRADVILLKFLRARDFRVNEALNMITKCLAWRKEFNADTIVEEDLSQFKELEGVIAYMQGYDKEGHPVCYNAYGLFRDKDMYERIFGDEEKLKKFLRWRVQVLERGIRLLHFKPGGVNSLIQVTDLKDMPKRELRVASNHILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLSLPTDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKIGASEEAIHNSFTSKESGKMILSVDNTASRKKKVAAYRYVVRKCATT 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00345 451 Gene3D - 78 154 - -
Mepo2g00345 451 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 162 337 IPR001251 -
Mepo2g00345 451 FunFam SEC14 cytosolic factor family protein 172 347 - -
Mepo2g00345 451 PANTHER PATELLIN-1 39 447 IPR044834 GO:0008289
Mepo2g00345 451 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 348 445 IPR036598 -
Mepo2g00345 451 SUPERFAMILY CRAL/TRIO N-terminal domain 81 164 IPR036273 -
Mepo2g00345 451 Gene3D GOLD domain 343 445 - -
Mepo2g00345 451 ProSiteProfiles GOLD domain profile. 313 447 IPR009038 -
Mepo2g00345 451 Pfam CRAL/TRIO domain 172 331 IPR001251 -
Mepo2g00345 451 Gene3D - 157 342 IPR036865 -
Mepo2g00345 451 SUPERFAMILY CRAL/TRIO domain 170 332 IPR036865 -
Mepo2g00345 451 SMART sec14_4 170 334 IPR001251 -
Mepo2g00345 451 MobiDBLite consensus disorder prediction 22 50 - -
Mepo2g00345 451 CDD SEC14 165 332 IPR001251 -
Mepo2g00345 451 Pfam CRAL/TRIO, N-terminal domain 93 147 IPR011074 -
Mepo2g00345 451 SMART CRAL_TRIO_N_2 123 148 IPR011074 -
Mepo2g00345 451 Coils Coil 81 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00345 Mepo-Chr2 3776080 3778878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00345 127 326 Acyl Lipid Metabolism Gene Families AT1G55840 27.014 9.27e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00345 - - gmx:100809944 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01894 3 27686804 27689804 Mepo2g00345 2 3776080 3778878 PCT