Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00236 ATGCGATTAACTTCTTCTTCTTCAATGACATTCGGGTCGGGTTCTATGATATGGTTTCGAAAGGGTATTCGGATCCACGATAACCCAGCACTAGAATATGCTACACATGGGTGTTATAATCTTTACCCTCTTTTTGTTATTGACCCGCATTACATGAAACCCGACCCAAATGCATTCTCACCCGGTTCATCACGTGCGGGTCTGAACCGGATAAGTTTCTTGCTTGAGAGTCTCAGTGATCTTGATGTTAATCTTAAGAAGATTGGTTCGAGATTGTTGGTTCTTAAGGGTGATCCCAGTGAAGTTCTTATTCGGTGCTTGAAAGAGTGGAACATTGGAAAGTTATGCTTTGAGTATGACACTGATCCATACTATCAGGCTTTGGATATTAAAGTCAAGGACTATGCTCTTAAGGCAGGAATTGAGGTTTTCTCTCCTGTAAGCCACACACTTTTCAATCCAACAGATATTATACAGAAGAATGGAGGGAAGCCGCCTCTTAGTTATCAATCGTTTGTGAAGCTTGCAGGAGAACCGCCATCTCCTCTCGCAACTAAGTATTCTTCACTTCCTCCGGTTGGCCCTCTTGGAAGTTGCGATGTTTCTGAAGTTCCAACAATCAAAGACCTTGGATATGAAGATGATCAACTGGAATTCTCTCCGTTCAAAGGCGGTGAATCAGAAGCATTGAAGAGATTGGAAGAATGCATGAAAGACAAGACGTGGGTGGCAAACTTTGAGAAACCCAAGGGCAATCCATCTGCATTTCTTAAGCCAGCAACAACTATTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGATATTTCTACCAATGCATTCAAGATGTATATAAAAGTTTGCCAAAACATACTTCACCACCTGTGTCTCTTCTAGGACAGTTGTTGTGGCGAGATTTCTTTTACACCGCAGCTTTTGGTACTCCAAATTTCGATAGGATGAAAGGCAATAGGATATGCAAGCAGATTCCTTGGAAGGATGATGGTAAACTTTTGGAGGCTTGGAGAGATGCTAAGACAGGATTTCCTTGGATTGACGCTATCATGGTCCAGCTACGCCAATGGGGTTGGATGCATCATTTAGCACGACATTCTGTTGCATGTTTTCTAACTCGAGGTGATCTGTTTGTTCATTGGGAAAAAGGACGTGACGTCTTTGAGAGGCTTCTGATTGATTCAGATTGGGCAATTAATAATGGAAACTGGATGTGGCTGTCATGTTCATCTTTCTTTTATCAGTATAATCGTATTTATTCCCCAACCACATTTGGTAAGAAGTATGACCCTAATGGTGACTATATTAGGCATTTTCTCCCAGTCTTAAAAGATATGCCCAAGGCGTACATCTATGAACCATGGACTGCTCCTCCAAGCATCCAAACCAAAGCAAATTGCATAATCGGAAAAGACTATCCAATGCCAGTTGTTTCTCACGACTCTGCAAGTAAAGAGTGCAAAAGGAAAATGGGTGACGCGTATGCATTAAATAAAGCACTGAATGGTTTGGTTAGTGAAGATGATCTGAAAAACTTGAGGAGGAAATTGGATGAGGGTGAAGAACAAGGAACTAAATCTAAAAGATCTAGGCAGCTGCTGATTGGCTGA 1629 0.415 MRLTSSSSMTFGSGSMIWFRKGIRIHDNPALEYATHGCYNLYPLFVIDPHYMKPDPNAFSPGSSRAGLNRISFLLESLSDLDVNLKKIGSRLLVLKGDPSEVLIRCLKEWNIGKLCFEYDTDPYYQALDIKVKDYALKAGIEVFSPVSHTLFNPTDIIQKNGGKPPLSYQSFVKLAGEPPSPLATKYSSLPPVGPLGSCDVSEVPTIKDLGYEDDQLEFSPFKGGESEALKRLEECMKDKTWVANFEKPKGNPSAFLKPATTILSPYLKFGCLSSRYFYQCIQDVYKSLPKHTSPPVSLLGQLLWRDFFYTAAFGTPNFDRMKGNRICKQIPWKDDGKLLEAWRDAKTGFPWIDAIMVQLRQWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGDYIRHFLPVLKDMPKAYIYEPWTAPPSIQTKANCIIGKDYPMPVVSHDSASKECKRKMGDAYALNKALNGLVSEDDLKNLRRKLDEGEEQGTKSKRSRQLLIG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00236 542 Gene3D HUPs 17 224 IPR014729 -
Mepo2g00236 542 Pfam DNA photolyase 16 176 IPR006050 -
Mepo2g00236 542 PANTHER CRYPTOCHROME 15 505 IPR002081 -
Mepo2g00236 542 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 317 541 - -
Mepo2g00236 542 MobiDBLite consensus disorder prediction 522 542 - -
Mepo2g00236 542 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 13 151 IPR006050 -
Mepo2g00236 542 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 15 198 IPR036155 -
Mepo2g00236 542 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 214 503 IPR036134 -
Mepo2g00236 542 Gene3D - 149 310 - -
Mepo2g00236 542 Pfam FAD binding domain of DNA photolyase 301 497 IPR005101 -
Mepo2g00236 542 FunFam Cryptochrome-1 317 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00236 Mepo-Chr2 2682371 2688049 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00236 K02295 - gmx:100780347 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g00236 2 2682371 2688049 Mepo2g00236 2 2682371 2688049 ECH