Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00168 ATGTCATCTCTGAGTAGGGAATTGGTGTTCTTGATCTTGCAGTTTCTGGATGAGGAAAAGTTCAAAGAGACTGTTCACAAGCTTGAGCAGGAGTCAGGATTTTTCTTTAACATGAAATATTTTGAGGATGAAGTTCATAATGGGAATTGGGATGAAGTTGAAAAGTACTTATCTGGTTTCACAAAAGTAGATGATAATAGGTATTCTATGAAGATATTTTTTGAGATAAGGAAGCAAAAGTATCTTGAGGCATTGGATAAGCATGATCGGTCGAAAGCTGTAGAGATATTAGTGAAGGATTTGAAAGTGTTTGCCACGTTTAATGAAGAATTGTTCAAGGAAATCACACAACTATTGACATTGGAGAATTTTAGGGAAAATGAACAGTTGTCAAAGTATGGTGATACTAAGTCTGCACGGGCAATCATGTTGGTTGAGCTTAAAAAGCTCATTGAAGCTAATCCGTTATTTCGCGACAAATTGCAATTTCCTAACCTTAAAAACTCGAGGTTAAGGACACTCATCAATCAAAGCTTGAATTGGCAGCATCAACTATGTAAGAATCCACGTCCAAATCCTGATATAAAAACTCTTTTTGTGGATCACTCATGTGGACAACCAAATGGTGCACGTGCTCCTTCACCTGCTAACAGTCCGTTATTAGGATCCTTACCGAAGGCTGGTGGATTTCCTCCTCTTGGTGCTCATGGGCCTTTTCAACCTAATCCGGCAGCAGTGCCAACACAGCTTGCTGGTTGGATGTCAAATCCTACCACTGTAGCACATGCTGCAGTTTCTGGTGCTGGAGCTATAGGTCTTGGTGCTCCATCAATGCCTGGTGCTTTGAAGCATCCACGGACTCCTCCAATTAATCCGTCTGTCGACTATCCATCCGGTGATTCAGATCATGTTGCCAAGAGAACAAGGCCAATGGGAATAACAGATGAGGTAAATCTACCTGTCAATGTGTTGTCGGGAACATTCCCAGGTCATGGACATAGTCAGGCTTTTAACGCACCTGATGACTTGCCATTGCCGAAGACTGTCATGCGAACTCTGAATCAGGGCTCATCTCCTATGAGCATGGACTTTCATCCAGTTCAACAATCTTTACTGCTAGTTGGCACAAATGTGGGGGACATTGCCTTATGGGAAGTGGGTTCTAGGGAGAAGTTGGTCTCAAGGAACTTCAAAGTTTGGGATCTTAGTGCATGTTCAATGCCATTTCAGATTTGTGTGTGGAACACTGACGGATGGGAAAAACAGAAGACTAGATTCTTGCAGCTACCTCCCGGGAGGACTCCATCAGCACAGTCAGATACACGTGTACAGTTTCATCAGGATCAGATACAGTTCTTGGTCGTACACGAAACTCAGCTTGCCATTTTTGAAGCAACTAAATTAGAATGTCTAAAGCAGTGGGCCCCACGGGATTCTTCTGCACCAATATCGCATGCAACGTTTTCGTGTGACAGCCAGCTGATATATGCAAGCTTTTTAGACGCAACAGTCTGTGTATTTAATGCTTCAAATCTCAGACTGCGCAGCAATTCAAACGTACAACCACTAGTAATTGCAGCACATCCACATGAAGCAAATCAGTTTGCTGTAGGACTATCAGATGGTGGAGTTCATGTGTTCGAGCCACTCGAATCCGAAGGCAAATGGGGCGTGCCACCTCCAAACGAGAACGGATCATCTAGCAATAATGTAGCAGTAGCTACTTCAGTTGGACTTTCTTCAGACCAAGCACAAAGATGA 1761 0.431 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFATFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANSPLLGSLPKAGGFPPLGAHGPFQPNPAAVPTQLAGWMSNPTTVAHAAVSGAGAIGLGAPSMPGALKHPRTPPINPSVDYPSGDSDHVAKRTRPMGITDEVNLPVNVLSGTFPGHGHSQAFNAPDDLPLPKTVMRTLNQGSSPMSMDFHPVQQSLLLVGTNVGDIALWEVGSREKLVSRNFKVWDLSACSMPFQICVWNTDGWEKQKTRFLQLPPGRTPSAQSDTRVQFHQDQIQFLVVHETQLAIFEATKLECLKQWAPRDSSAPISHATFSCDSQLIYASFLDATVCVFNASNLRLRSNSNVQPLVIAAHPHEANQFAVGLSDGGVHVFEPLESEGKWGVPPPNENGSSSNNVAVATSVGLSSDQAQR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00168 586 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 410 IPR027728 GO:0006355
Mepo2g00168 586 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Mepo2g00168 586 SMART WD40_4 346 385 IPR001680 GO:0005515
Mepo2g00168 586 SMART WD40_4 467 508 IPR001680 GO:0005515
Mepo2g00168 586 SMART Lish 4 36 IPR006594 GO:0005515
Mepo2g00168 586 Pfam LisH-like dimerisation domain 5 33 - -
Mepo2g00168 586 SUPERFAMILY WD40 repeat-like 349 549 IPR036322 GO:0005515
Mepo2g00168 586 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Mepo2g00168 586 SMART ctlh 34 92 IPR006595 -
Mepo2g00168 586 MobiDBLite consensus disorder prediction 561 586 - -
Mepo2g00168 586 MobiDBLite consensus disorder prediction 552 586 - -
Mepo2g00168 586 Gene3D - 328 580 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00168 Mepo-Chr2 1878083 1885781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00168 - - gmx:100782671 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g00168 2 1878083 1885781 Mepo2g00168 2 1878083 1885781 ECH