Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04744 ATGGGAAAAATTCCTCCTTCATTTCGATCCGCACTCTCAAACCCTAATTTGATTCACCGTTCTTCTTCATTGATTCCTTCTTCTCCTAAACCCCATCATTTTCCCAATAAAACCCGAAAACCCCATCAAAAACAACAAAAACAACAATCTCAATCTCCAAAACCCGTTTCTGTATTCAAATCCCCAAATCTCCAAGATGCCAAAAGCATCTTCAATTCCTTCGTTAACAGTTCCAATGCTCCGATTGATTCCCGTTTCCATAACTCCCTTCTTCAATCCTATGCTTCTATTTCCACCATTAACGATTCCATTGCTTTTCTTCGTCATATGACAAAGACCCATCCTTCATTCTCACCTGATAAATCTACTTATCATATCTTACTCACCCATTGCTGCAAATCAACTGATTCCAAGGATTCTACACTTTCCCTGATTCATCAAACCCTAAATTTGATGGTTTCTGATGGGGTCAGTCCTGATAAAGGTACTGTTGATTTAGCTGTTAGGTCACTTTGTACTGCGGATCGTGTTGACGATGCTGTTGAATTGATCAAAGAGCTGTCTTCCAAGCATTGTAGTCCTGATATTTACACTTACAATTTTCTAGTTAAGAATCTATGTAAGTGTCGTACTTTGAGTTTGGTTTATGCTTTTATTGATGAAATGCGTACCGAGTTTGATGTCAAGCCTAATCTTGTTACTTATACTATTTTGATTGATAATGTTTGTAACACTAAGAATTTGCGTGAGGCAACGAGGTTGGTGGATATTCTCGAAGAGGAAGGTTTTAAGCCAGATTGTTTTCTTTATAATACCATTATGAAAGGTTATTGTATGCTGAGTAGAGGGAGTGAAGCCATTGAGGTTTATAATCGAATGAAGGAGAAGGGTGTGGAGCCTGATCTTATTACTTATAATACTTTGATTTTTGGGTTATCGAAATCTGGTCGGGTTTCAGAAGCTAAGAAGTTATTGCGTGTTATGGCGGAAAAGGGTCATTTCCCTGATGAGGTAACTTATACCTCTCTGATGAATGGGATGTGCAGGAAAGGGGAGACCTTGGCTGCATTGGCATTGTTGGAAGAGATGGAAATGAAGGGCTGCAGTCCGAATACGTGCACGTATAACACGCTGCTTCATGGGTTGTGTAAGTCTAGGATGTTTGATAAGGCCTTGGAATTGTATGGTGCGATGAAATCAGATGGTCTTAAGCTTGATATGGCTTCTTATGCTACGTTTGTCAGGGCACTGTGTAGTGTTGGTAGAATTGCGGATGCTTATGAAGTGTTTGATTATGCAGTCGAAAGCAAGAGTTTGACAGATGTCGCTGCTTACTCTACATTGGAAAGCACACTTAAATGGTTCAAGAAAGCAAAAGAAGAAGGCCTTAAATTTTAA 1398 0.3934 MGKIPPSFRSALSNPNLIHRSSSLIPSSPKPHHFPNKTRKPHQKQQKQQSQSPKPVSVFKSPNLQDAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKDSTLSLIHQTLNLMVSDGVSPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYTYNFLVKNLCKCRTLSLVYAFIDEMRTEFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKALELYGAMKSDGLKLDMASYATFVRALCSVGRIADAYEVFDYAVESKSLTDVAAYSTLESTLKWFKKAKEEGLKF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04744 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 301 335 IPR002885 -
Mepo1g04744 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 231 265 IPR002885 -
Mepo1g04744 465 MobiDBLite consensus disorder prediction 45 59 - -
Mepo1g04744 465 Gene3D Tetratricopeptide repeat domain 57 208 IPR011990 GO:0005515
Mepo1g04744 465 Gene3D Tetratricopeptide repeat domain 209 314 IPR011990 GO:0005515
Mepo1g04744 465 MobiDBLite consensus disorder prediction 1 59 - -
Mepo1g04744 465 Gene3D Tetratricopeptide repeat domain 326 464 IPR011990 GO:0005515
Mepo1g04744 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 371 405 IPR002885 -
Mepo1g04744 465 SUPERFAMILY HCP-like 246 438 - -
Mepo1g04744 465 PANTHER ATPASE EXPRESSION PROTEIN 3 190 448 - -
Mepo1g04744 465 MobiDBLite consensus disorder prediction 9 29 - -
Mepo1g04744 465 Pfam PPR repeat family 335 384 IPR002885 -
Mepo1g04744 465 Pfam PPR repeat family 170 208 IPR002885 -
Mepo1g04744 465 Pfam PPR repeat family 265 312 IPR002885 -
Mepo1g04744 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 266 300 IPR002885 -
Mepo1g04744 465 Pfam PPR repeat 227 256 IPR002885 -
Mepo1g04744 465 Pfam PPR repeat 401 432 IPR002885 -
Mepo1g04744 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 406 440 IPR002885 -
Mepo1g04744 465 NCBIfam pentatricopeptide repeat 269 301 IPR002885 -
Mepo1g04744 465 NCBIfam pentatricopeptide repeat 373 406 IPR002885 -
Mepo1g04744 465 NCBIfam pentatricopeptide repeat 338 372 IPR002885 -
Mepo1g04744 465 NCBIfam pentatricopeptide repeat 303 337 IPR002885 -
Mepo1g04744 465 NCBIfam pentatricopeptide repeat 233 267 IPR002885 -
Mepo1g04744 465 NCBIfam pentatricopeptide repeat 168 196 IPR002885 -
Mepo1g04744 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 336 370 IPR002885 -
Mepo1g04744 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 160 194 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04744 119 460 Glycosyltransferase AT1G05670 29.240 2.10e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04744 - - jre:109018808 656.751