Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04740 ATGGAAATGTTTGGTTTGGATATTATGGACCATACGGTCCTTCAAAAAATTGTTGTTGTTTTATTTTGTACTTTTTTGTTTTGGAAGATCATTAGATACATGAGTGATCTTCTCAAAGTTGAGAAAGAACCGGTCACGGTATTGGTCACTGGTGCTGCAGGACAAATTGGATATGCACTTGTTCCAATGATAGCAAGAGGGATGATGTTAGGCCCAAATCAACCTGTAATTTTGCATATGCTTGATATTGAACCAGCATTGGAGGCACTTAAAGGGGTGAAGATGGAGCTAATTGATGCTGCTTTCCCACTTCTTAGAGGTGTTGTTGCTACTACGGATGTTGTTGAAGCTTGCAAGGATGTAAACATTGCTGTTATGGTTGGCGGATTCCCACGGAAGGAAGGAATGGAAAGAAAAGATGTAATGTCTAAGAATGTTTCAATTTACAAGGCTCAAGCTTCAGCTTTGGAGGAGAATGCTGCTGCAGATTGTAAAGTGCTAGTAATTGCCAATCCAGCAAACACAAATGCTCTAATATTGAAAGAATTTGCTCCATCAATCCCTGAGAAAAATATAACATGTCTAACTAGACTTGATCATAATAGAGCATTAGGCCAAATCTCAGAGAAGCTAAATGTTCATGTTAGTGATGTGAAAAATGTTATCATTTGGGGAAATCACTCCTCAACTCAATATCCAGACGTCAACCACGCAACCGTGGCAACAAGTAATGGCCAGAAGCATGTCAGAGAATTAGTTGCTGATGATAATTGGCTAAACAGTGAGTTCATCACAACTGTTCAGCAACGTGGGGGTGCCATTATCAAAGCAAGGAAGCTGTCTAGTGCATTATCAGCAGCAAGTGCTGCTTGTGATCATATTCGTGATTGGGTTCTAGGAACGCCTAAGGGAACATGGGTATCAATGGGAGTGTATTGTGATGGATCTTATGGTATCCAACCTGGTCTCATTTACTCTTTTCCTGTTACATGTGACAAAGGAGAATGGAATATTGTACAAGGGCTCAAGATTGATGAATTCTCAAGGGAAAAGATGGATAAAACAGCTCAAGAGCTCATTGAGGAGAAAACATTGGCTAACTCGTGCCTTTAA 1113 0.4007 MEMFGLDIMDHTVLQKIVVVLFCTFLFWKIIRYMSDLLKVEKEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVILHMLDIEPALEALKGVKMELIDAAFPLLRGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEENAAADCKVLVIANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISEKLNVHVSDVKNVIIWGNHSSTQYPDVNHATVATSNGQKHVRELVADDNWLNSEFITTVQQRGGAIIKARKLSSALSAASAACDHIRDWVLGTPKGTWVSMGVYCDGSYGIQPGLIYSFPVTCDKGEWNIVQGLKIDEFSREKMDKTAQELIEEKTLANSCL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04740 370 PANTHER MALATE DEHYDROGENASE 42 369 IPR010945 GO:0006108|GO:0016615
Mepo1g04740 370 NCBIfam malate dehydrogenase, NAD-dependent 47 367 IPR011274 GO:0006108|GO:0030060
Mepo1g04740 370 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 196 364 IPR022383 GO:0016616
Mepo1g04740 370 CDD MDH_cytoplasmic_cytosolic 43 367 IPR011274 GO:0006108|GO:0030060
Mepo1g04740 370 NCBIfam malate dehydrogenase 42 365 IPR010945 GO:0006108|GO:0016615
Mepo1g04740 370 Gene3D - 42 194 - -
Mepo1g04740 370 Gene3D - 195 370 IPR015955 GO:0003824|GO:0016616
Mepo1g04740 370 FunFam Malate dehydrogenase 42 194 - -
Mepo1g04740 370 FunFam Malate dehydrogenase 195 370 - -
Mepo1g04740 370 PIRSF Lac_mal_DH 41 368 IPR001557 GO:0016616|GO:0019752
Mepo1g04740 370 ProSitePatterns Malate dehydrogenase active site signature. 195 207 IPR001252 GO:0006108|GO:0016615
Mepo1g04740 370 Pfam lactate/malate dehydrogenase, NAD binding domain 46 192 IPR001236 GO:0016491
Mepo1g04740 370 SUPERFAMILY LDH C-terminal domain-like 196 368 IPR015955 GO:0003824|GO:0016616
Mepo1g04740 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 194 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04740 Mepo-Chr1 55422805 55425278 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04740 K00025 - gmx:100783188 627.091