Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g04696 | ATGGATTACGAAGAAGATGAAGAAGAAGTAGGTGAAGAAGTTGAAGCTATGAAAGCTGTTTATGAAACTGATTGTGTCATTCTCTCTTCCATTCCTCCTCACTTCCATTTATCCCTCAAACCCCGAACCGCTGATGTTTCCTATGATCAGTTTGTAGAAATTGTTCTTGAGGTTAAAGCAACACCAAAGTATCCAAAAGAACCACCTTTTGTTGCTCTTGTGGATTGCAAGGGTTTGGACCAACACAGACAAAAGCATTTATTGAATCACATAGAAAGTAAAGCCAACGAGCTTTCCCCTGGCTTAATGCTTGTAGCTCTTTGTGAGGAAGCGGTAGAGAAACTCTCATCTATGAATCATCCTGATGGTGATTGCCCGTTGTGTTTATTCCCTTTGGTCACAGAAGATCACCAAAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGTTTTCACAGTGAATGTATCATTAGATGGTGGAATTGGATTGAAAGTTCTAAACAAACAAGCTCTCCCAATTCAGATAATGCAACTGCTAATCGTAGCCGGGGTAATCGTGAAAAATTGGAAGAGGGTGTTGGAAACTGCCCTGTCTGTCGCAAGCCTTTTCATGCCAAAGATTTGGACCATGTGCTTGACCTAGTTGGCTCACATTCTTCCAGAGTGAGTTTGAATAACGATGAAGTCGATAATGATGAAAAAATCCTTCAATCGGAGAATGAGATCATCAGAAAACAAAGGTTTGAAGCCATCTTAAGTTTACAGAAGGAGAACAATGGTTTGATTGAACCTAAAAAAGATATAGTAATATTGCCTGGTATGTATCTTCAACAACCGGTTGCAGCGCCCACGTCAACCAAGGAACCTGACGAGATTGAACAACAAGAAAGAGATCCACCTGCAGTTGGGTCAGGAAGACATGTCGGCGGGACCTCAAATGGGCCTAGTTCAAGTGGTAACAGGAATACCGGTACAAGAAGGAATAGACCAAGAAACGGCCATCATTCTAGTTCAACTGCAAGACATCCAAGAAAATCGGTCCAACAACAGTGGGTTAGAAGAGATAATCCTAGCAATAAGCAATAG | 1095 | 0.4119 | MDYEEDEEEVGEEVEAMKAVYETDCVILSSIPPHFHLSLKPRTADVSYDQFVEIVLEVKATPKYPKEPPFVALVDCKGLDQHRQKHLLNHIESKANELSPGLMLVALCEEAVEKLSSMNHPDGDCPLCLFPLVTEDHQSETLPFMKLMSCFHCFHSECIIRWWNWIESSKQTSSPNSDNATANRSRGNREKLEEGVGNCPVCRKPFHAKDLDHVLDLVGSHSSRVSLNNDEVDNDEKILQSENEIIRKQRFEAILSLQKENNGLIEPKKDIVILPGMYLQQPVAAPTSTKEPDEIEQQERDPPAVGSGRHVGGTSNGPSSSGNRNTGTRRNRPRNGHHSSSTARHPRKSVQQQWVRRDNPSNKQ | 364 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g04696 | 364 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 121 | 217 | IPR013083 | - | |
| Mepo1g04696 | 364 | MobiDBLite | consensus disorder prediction | 312 | 329 | - | - | |
| Mepo1g04696 | 364 | MobiDBLite | consensus disorder prediction | 170 | 191 | - | - | |
| Mepo1g04696 | 364 | MobiDBLite | consensus disorder prediction | 283 | 364 | - | - | |
| Mepo1g04696 | 364 | SUPERFAMILY | RING/U-box | 118 | 209 | - | - | |
| Mepo1g04696 | 364 | SUPERFAMILY | UBC-like | 6 | 115 | IPR016135 | - | |
| Mepo1g04696 | 364 | SMART | RWD2001b | 12 | 118 | IPR006575 | GO:0005515 | |
| Mepo1g04696 | 364 | FunFam | eIF-2-alpha kinase GCN2 | 1 | 124 | - | - | |
| Mepo1g04696 | 364 | MobiDBLite | consensus disorder prediction | 345 | 364 | - | - | |
| Mepo1g04696 | 364 | ProSiteProfiles | RWD domain profile. | 12 | 118 | IPR006575 | GO:0005515 | |
| Mepo1g04696 | 364 | ProSiteProfiles | Zinc finger RING-type profile. | 125 | 203 | IPR001841 | - | |
| Mepo1g04696 | 364 | MobiDBLite | consensus disorder prediction | 330 | 344 | - | - | |
| Mepo1g04696 | 364 | FunFam | RWD domain-containing protein | 121 | 218 | - | - | |
| Mepo1g04696 | 364 | PANTHER | RING FINGER PROTEIN 25 | 5 | 352 | IPR039133 | GO:0061630 | |
| Mepo1g04696 | 364 | SMART | ring_2 | 125 | 202 | IPR001841 | - | |
| Mepo1g04696 | 364 | Gene3D | Ubiquitin Conjugating Enzyme | 1 | 120 | IPR016135 | - | |
| Mepo1g04696 | 364 | Pfam | RWD domain | 8 | 114 | IPR006575 | GO:0005515 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo1g04696 | K10640 | - | gmx:100791789 | 492.656 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo1g04696 | 1 | 54906279 | 54910977 | Mepo1g04696 | 1 | 54906279 | 54910977 | ECH |