Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g04695 | ATGATGGGTGCTATCAGTATCATGGCTTTACCACTCGTCATCTCCGTTTTCAAACCTCTCTCCACCACCACCCGCCTCCACTCTACACTCTTACGCCGCCGTCGTTTCACTACCACTACTCTCTCCGCCACCATTTCACCTTCAACTTCTCTCTCTCAAAACTCTTCTACTTCTTCTTCTACACACTCCAACAATTCTTCTCCTCACAACCATTCATCTCTCACTTTTCAGCAAGCCATTCAACGCCTTCAGGAATATTGGGCTTCTGTTGGATGTTCTATCATGCAATGCAGCAATACAGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTTCTTGGTCCAGAACCATGGAATGTTGCGTATGTGGAACCTAGCATCCGCCCTGATGACAGTCGATATGGAGAAAACCCAAATAGGCTCCAAAGACACACTCAATTTCAGGTAATATTGAAGCCTGATCCTGGAAATTCACAGGACCTTTTTATCCGCAGCCTTTCAGCTTTAGGTATTGATGTCACTGCACATGATATACGATTTGTAGAGGACAACTGGGAGAGTCCGGTTCTTGGTGCGTGGGGCCTGGGGTGGGAAATTTGGATGGACGGAATGGAGATTACTCAATTCACCTACTTTCAGCAGGCTGGAAGTCTCCCGTTATCACCAGTGTCGGTAGAAATCACTTATGGCCTGGAGCGTATCCTCATGTTACTGCAGGGAGTTGATCACTTCAAAAAGATCAAATATTCTGATGGAATTACTTACGGAGAACTGTTCTTGGAGAATGAAAAGGAAATGAGTGCGTATTACTTGGAGCATGCCGGTGTTGATCATCTTCAAAAACATTTTGATTTCTTTGAGGAGGAATCTCGTCGTTTACTTTCTTCAGACCTTGCGATCCCTGCGTATGATCAGCTTCTGAAAACATCTCATGCTTTTAATATTTTAGATGCCAGAGGCTTTGTTGGAGTAACAGAGCGTGCTCGATATTTTGGTCGCATGCGCAGTTTAGCTCGCCAGTGTGCCCAACTTTGGCTGAAGACCAGAGAGACTCTTGGCTTCCCCCTTGGTTTGATCTCGGAACCTGATCAGTCTGTAATACCAAAGGATGTTTTGGAGGCTGCCCGTGAGAAGGTTCATGATAATGAAAGAACATTTGTTCTTGAAATTGGAACTGAAGAGATGCCACCTCAAGATGTTGTTGATGCAAGCAAGCAACTGAAAGATTTAATATTGCAATTACTGGAACGACAGAGGTTAAAGCATGGTGAAGTGCAGATTTTTGGCACTGCACGGAGACTTGTGGTTTCTGTTGAAAATCTTTTCACAAAACAAACAGAACAGGAGGTTGAGGTTCGAGGTCCTCCTGTTTCAAAAGCATTTGATTCTGATGGAAATCCAACAAAGGCTGCTGAGGGGTTTTCCCGTAAAAACTCTGTTCCACTGGACTTGATATACAGAAAGGTTGATGGGAAAACAGAATATGTATATGCTCGTATAAAAGAGTCTTCAAGACATGCTTTGGAGGTTTTATCTGAAGATTTACCTGCTACTATTGCTAAAATTTCATTTCCAAAGACAATGCGTTGGAACTCACAGGTGATGTTTAGCAGGCCAATCCGTTGGATTTTGGCCTTGCATGGAGATGCTGTGGTCCCATTTATGTTTGCTGGGGTAACGAGTGGAAACTTGTCTTGCGGTCTTCGTAATACGACATCAGCCGTTGTCCAGATAGAAAAAGCAGAATCTTATTCGCTTACAATGAAAAATGCGGGAGTCAATGTTGAATTTGAGGACCGTAAGAAAAAAATTGAAGAGCTATCTAATACATTAGCAGAAAGTGTAAATGGCGAAATTCTGATTCCAAAAGGTTTGCTTGACGAGGTTGTAAATCTTGTTGAAGCACCTATTCCAGTGCTTGGAAAGTTTAAAGAAACCTTCTTAGATCTTCCAAAGGATCTTTTGACTATGGTTATGCAAAAACACCAGAAATATTTTGCTGTATGTGATGCTAATGGACAATTGCTGCCTTACTTTATTGCTGTTGCAAACGGAGCAATTGATGAAGCTACAGTGAGGAAAGGAAATGAAGCCGTGCTCAGGGCTCGCTATGAAGATGCTAAGTTCTTTTACGAGTTGGACACTCGTAAAAGGTTTTCAGAATTCCGAGAGCAACTGAAAAATATTCTCTTTCATGAGAAACTTGGGACCATGCTGGATAAAATGACTCGTGTTGAAAACATGGTTACTAAGCTAAGTTGCATCCTGGATATTAATGAAGATACACAACAAATTATCCGGGAAGCTGCCTCACTTGCCATGTCTGACCTTTCCACATCAGTTGTCACTGAATTTACCGCACTTTCAGGAGTAATGGGGCGTCACTATGCCCTTAGAGATGGATACTCAGAACAGACTGCAGAGGCCTTGTATGAGATCACACTTCCTAGATTTTCTGGGGACATACTTCCTAAAAGTGACGCTGGCATAGTTTTGGCAATTGCTGATAGATTAGATAGCTTGGTAGGTTTATTCTCGGCTGGCTGTCAACCTAGTTCTACAAATGATCCATTTGGTCTGCGAAGAATCTCATATGGTCTTGTGCAATTGTTGGTGGAAAATAATAAAAACCTAGATTTTAAAGAGGCTCTGGAACTTGCTGCAGATGTCCAGCCAATTAAAGTAAATCCTCAAGTAATAGATGAAGCACTTCAATTTGTTACTCGAAGATTAGAGCAATTTCTGGTAGACAAGGGGGTGAGTGCAGAAATTGTTCGTTCCATCCTTGCAGAGAGGGCTAATTTTCCCGGTCTAGCAGCAAAATCAGCATATAAAATGGAAGAATTATCAAAAGGCGAGCTTTTCCCTAAAGTAGTTGAAGCATACTCTCGGCCAACTAGAATTGTCCGTGGGAAGGAAGACGAGCTTGATGGGGAGTATCAGGTGGATGAGGCTGCCTTTGAGACAAATGAAGAGAGAGTTTTGTGGAACACATTTTTGTCGGTTAAAAAGAGTATCAATCCTGGTCTAGACATCGATGATTTTGTTGAAACTTCATCTCAGCTTATACAACCACTCGAAGATTTCTTTAATAACGTCTTTGTAATGGTGGATGATGCTAAGATCAGAAAAAACAGGCTAGCTCTGCTAAAAGAGATTGCTGATCTCCCTAAAGGAATTGCAGACCTTACATTGTTACCAGGATTTTAA | 3219 | 0.4209 | MMGAISIMALPLVISVFKPLSTTTRLHSTLLRRRRFTTTTLSATISPSTSLSQNSSTSSSTHSNNSSPHNHSSLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHAGVDHLQKHFDFFEEESRRLLSSDLAIPAYDQLLKTSHAFNILDARGFVGVTERARYFGRMRSLARQCAQLWLKTRETLGFPLGLISEPDQSVIPKDVLEAAREKVHDNERTFVLEIGTEEMPPQDVVDASKQLKDLILQLLERQRLKHGEVQIFGTARRLVVSVENLFTKQTEQEVEVRGPPVSKAFDSDGNPTKAAEGFSRKNSVPLDLIYRKVDGKTEYVYARIKESSRHALEVLSEDLPATIAKISFPKTMRWNSQVMFSRPIRWILALHGDAVVPFMFAGVTSGNLSCGLRNTTSAVVQIEKAESYSLTMKNAGVNVEFEDRKKKIEELSNTLAESVNGEILIPKGLLDEVVNLVEAPIPVLGKFKETFLDLPKDLLTMVMQKHQKYFAVCDANGQLLPYFIAVANGAIDEATVRKGNEAVLRARYEDAKFFYELDTRKRFSEFREQLKNILFHEKLGTMLDKMTRVENMVTKLSCILDINEDTQQIIREAASLAMSDLSTSVVTEFTALSGVMGRHYALRDGYSEQTAEALYEITLPRFSGDILPKSDAGIVLAIADRLDSLVGLFSAGCQPSSTNDPFGLRRISYGLVQLLVENNKNLDFKEALELAADVQPIKVNPQVIDEALQFVTRRLEQFLVDKGVSAEIVRSILAERANFPGLAAKSAYKMEELSKGELFPKVVEAYSRPTRIVRGKEDELDGEYQVDEAAFETNEERVLWNTFLSVKKSINPGLDIDDFVETSSQLIQPLEDFFNNVFVMVDDAKIRKNRLALLKEIADLPKGIADLTLLPGF | 1072 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g04695 | 1072 | SUPERFAMILY | Class II aaRS and biotin synthetases | 75 | 353 | IPR045864 | - | |
| Mepo1g04695 | 1072 | ProSiteProfiles | Heterodimeric glycyl-transfer RNA synthetases family profile. | 75 | 349 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | CDD | GlyRS_alpha_core | 75 | 353 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | MobiDBLite | consensus disorder prediction | 42 | 73 | - | - | |
| Mepo1g04695 | 1072 | SUPERFAMILY | HD-domain/PDEase-like | 721 | 865 | - | - | |
| Mepo1g04695 | 1072 | Pfam | Glycyl-tRNA synthetase beta subunit | 389 | 933 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | Gene3D | Bira Bifunctional Protein; Domain 2 | 60 | 277 | IPR045864 | - | |
| Mepo1g04695 | 1072 | FunFam | Glycine--tRNA ligase, chloroplastic/mitochondrial 2 | 278 | 357 | - | - | |
| Mepo1g04695 | 1072 | Pfam | Glycyl-tRNA synthetase alpha subunit | 76 | 353 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | FunFam | Glycine--tRNA ligase alpha subunit | 68 | 277 | - | - | |
| Mepo1g04695 | 1072 | Gene3D | Class II aaRS and biotin synthetases; domain 2 | 278 | 357 | - | - | |
| Mepo1g04695 | 1072 | Hamap | Glycine--tRNA ligase beta subunit [glyS]. | 386 | 1069 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | NCBIfam | glycine--tRNA ligase subunit alpha | 75 | 359 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | ProSiteProfiles | Heterodimeric glycyl-transfer RNA synthetases family profile. | 743 | 1034 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | PANTHER | GLYCYL-TRNA SYNTHETASE | 72 | 1070 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | Hamap | Glycine--tRNA ligase alpha subunit [glyQ]. | 74 | 354 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 206 | 226 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 128 | 143 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 229 | 244 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 314 | 330 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 149 | 169 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 180 | 204 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Mepo1g04695 | 1072 | NCBIfam | glycine--tRNA ligase subunit beta | 388 | 1068 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo1g04695 | K14164 | - | gmx:100787365 | 1756.88 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo1g04695 | 1 | 54886032 | 54904203 | Mepo1g04695 | 1 | 54886032 | 54904203 | ECH |