Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04672 ATGGAAGCATCAACTGAAACTAACAACAATTCCGGCGAAGAGGAGCAGGTGGTGACTCCATGGGAAGTTGCCGGCAACGGAGGCAAAATCGATTACGACAAACTCATCGACCGTTTCGGTTGTCAAAGAATCGATCAATCTCTCGTTCAACGCGTTGAGAAACTCACTTCTCAGCCCGCTCATGTCTTCCTCCGTCGCAACGTCTTCTTCGCTCACCGTGATTTTGCTGAGATTTTGGATGCATTTGAAAAGGGAGAGAAGTTTTACCTGTATACAGGACGTGGACCTTCTTCTGAAGCTTTGCATTTGGGTCATTTGATTCCATTCATGTTCACAAAGTATTTGCAAGAGGCTTTTAAGGTTCCTCTGGTTATACAGCTCACTGATGATGAGAAGTTCTTGTGGAAAAATCTTACTATAGAGGAGAGCCGAAGACTTGCGAGGGAGAATGCAAAGGATATCATTGCTTGTGGTTTTGACGTATCAAAGACATTCATCTTTTCTGATTTCGATTATGTTGGCGGTGCCTTCTACAGAAACATGGTACAGATTGGAAAGCGTGTGACTTATAACCAGGTTGTTGGCATTTTTGGCTTCATTGGGGAAGATCATATTGGAAAAGTTAGTTTTCCACCTGTGCAGGCAGCTCCATCATTTCCTAGTTCATTTCCACATCTATTTGAAGGCAAAGAGAATCTCCGTTGTTTAATTCCTTGTGCAATCGACCAGGATCCTTATTTTAGAATGACACGAGATGTTGCTCCTAAAATCGGATACAACAAGCCTGCTTTGATTGAATCATCATTTTTCCCTGCATTACAGGGAGAAACAGGAAAAATGTCTGCCAGTGATCCCAATTCTGCAATATATGTGACTGATTCTGCAAAAGATATAAAGAATAAGGTAAACAGATATGCATTCTCCGGCGGGCAAGATTCTATAGAAAAACATAGACAATTAGGGGCAAATCTTGAGGTAGATATACCTATCAAATACCTTTCTTTTTTCCTGGAAGATGATGCTGAACTTGAACACATAAAGAAGGAGTATGGAGCAGGACGCATGCTAACTGGTGAGGTGAAGCAACGTCTAATTCAAGTTTTGACAGAAATAGTGGAGAGACATCGGACGGCTCGAGCTAATGTGACTGAAAAGATGGTGGATGCATTTATGGCTGTCAGGCCACTTCCCCACATGTTTGACTGA 1206 0.4221 MEASTETNNNSGEEEQVVTPWEVAGNGGKIDYDKLIDRFGCQRIDQSLVQRVEKLTSQPAHVFLRRNVFFAHRDFAEILDAFEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVIQLTDDEKFLWKNLTIEESRRLARENAKDIIACGFDVSKTFIFSDFDYVGGAFYRNMVQIGKRVTYNQVVGIFGFIGEDHIGKVSFPPVQAAPSFPSSFPHLFEGKENLRCLIPCAIDQDPYFRMTRDVAPKIGYNKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKDIKNKVNRYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDAELEHIKKEYGAGRMLTGEVKQRLIQVLTEIVERHRTARANVTEKMVDAFMAVRPLPHMFD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04672 401 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 96 106 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mepo1g04672 401 SUPERFAMILY Nucleotidylyl transferase 15 394 - -
Mepo1g04672 401 CDD TrpRS_core 89 371 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mepo1g04672 401 FunFam tryptophan--tRNA ligase, cytoplasmic 11 283 - -
Mepo1g04672 401 FunFam Tryptophan--tRNA ligase, cytoplasmic 284 401 - -
Mepo1g04672 401 Gene3D HUPs 6 282 IPR014729 -
Mepo1g04672 401 NCBIfam tryptophan--tRNA ligase 87 392 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mepo1g04672 401 PRINTS Tryptophanyl-tRNA synthetase signature 101 117 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mepo1g04672 401 PRINTS Tryptophanyl-tRNA synthetase signature 235 256 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mepo1g04672 401 PRINTS Tryptophanyl-tRNA synthetase signature 279 289 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mepo1g04672 401 PRINTS Tryptophanyl-tRNA synthetase signature 153 172 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mepo1g04672 401 PANTHER TRYPTOPHANYL-TRNA SYNTHETASE 5 397 - -
Mepo1g04672 401 Pfam tRNA synthetases class I (W and Y) 85 371 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mepo1g04672 401 Gene3D - 283 400 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04672 K01867 - qsu:112016126 708.753