Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04566 ATGAAAATCCTAATCGCTTATGTTTTGATTCTTGGTTTTTTTTCACCTTGTATATGTCAAAGGTGGAATCTAGTTGGAACAAAAAAGAATACGTTTAATGTCATGGAATATGGTGCTCGTGGTGATGGCAAATATGATGATTCACATGCATTTTTAAGTGCATGGAAAAGTACATGTGCAGCTAAAGGGTCAGCAACACTAGTTATACCACCCCAAAAAAAATTCTTGGTGACGAACTTATTATTCAGTGGTGCTTGCAAGGCCACAAGTATTCACATTAAGATTCAAGGAAAAATAGTTGCACCTTCTAAGAAATCATGGAAATCTGGGTTGGAATGGATTAGGATCCAATATGTAAACGGTCTCACAATTGATGGCACGGGAGGAGGAATTGACGGCTATGGTTCTACATGGTGGCCATGCATAAGTTGCCCTCGACCTATAATCTTGTCTTTCCATTCTTGCAATGATCTTAGTGTTAGTAAACTAAAGATCACCAATAGCCCAGGAGGTCATATAGCCATAAATGGTTGCTACGGTGCAAAATTCTCCAATTTAGTGATCGATTCTCCTTCTAATAGCCCCAACACCGATGGGTTTGACATTTCTGCTTCGAAGAATATCTTGATAGAAGATTCAACCATTCAAACAGGTGATGATTGTATTGCCCTCAATGGTGGTTCTTCTTACATCAACGTTACCCGTGTTTTTTGTGGACCCGGCCATGGAATAAGCATTGGCAGCCTTGGTAAACATAATTCTCATGAAATAGTTGAAGAAGTTTATGTACGGAACTGCACCTTCATTGAAACTACAAATGGAGCAAGAATCAAGACATTTCCTAATTCAGCCGTGCAAGTGAATGATGTGACATATCGTGGATTTAACGGAACTTGTGCCGGTGATATTGCTATTGATTTGGATTGCATGAGTTGTTTCAACATTGTATTGGATCAAATTAACATTGTCTCTTCTCAAATGAGAAATAAGGTTTCTGCTATTTGTAAAAATTTCCATGGAAAAATTGATGATTCCATTGTTCCAAAGGTCTCTTGCAAATAA 1062 0.3804 MKILIAYVLILGFFSPCICQRWNLVGTKKNTFNVMEYGARGDGKYDDSHAFLSAWKSTCAAKGSATLVIPPQKKFLVTNLLFSGACKATSIHIKIQGKIVAPSKKSWKSGLEWIRIQYVNGLTIDGTGGGIDGYGSTWWPCISCPRPIILSFHSCNDLSVSKLKITNSPGGHIAINGCYGAKFSNLVIDSPSNSPNTDGFDISASKNILIEDSTIQTGDDCIALNGGSSYINVTRVFCGPGHGISIGSLGKHNSHEIVEEVYVRNCTFIETTNGARIKTFPNSAVQVNDVTYRGFNGTCAGDIAIDLDCMSCFNIVLDQINIVSSQMRNKVSAICKNFHGKIDDSIVPKVSCK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04566 353 Gene3D - 25 350 IPR012334 -
Mepo1g04566 353 SMART pbh1 258 279 IPR006626 -
Mepo1g04566 353 SMART pbh1 205 226 IPR006626 -
Mepo1g04566 353 SMART pbh1 228 248 IPR006626 -
Mepo1g04566 353 SMART pbh1 178 204 IPR006626 -
Mepo1g04566 353 SUPERFAMILY Pectin lyase-like 27 352 IPR011050 -
Mepo1g04566 353 ProSitePatterns Polygalacturonase active site. 235 248 IPR000743 GO:0004650|GO:0005975
Mepo1g04566 353 PANTHER - 29 280 - -
Mepo1g04566 353 Pfam Glycosyl hydrolases family 28 59 293 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04566 Mepo-Chr1 53473619 53478172 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04566 46 339 Glycoside Hydrolase AT4G32380 46.358 5.75e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04566 K01184 - mtr:25500200 473.781