Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04504 ATGGAAGCCTCAAAAAGGCCTTCTTCTTGTATCTCAAAGTGGCAATACTCTTCAACCAAAAGCAAAATTGTGAGTAACTTCAATCCTGTTTGCCAAGCTGTCCAAAAATTAACACTCAAAGGAAAGTTTGTGATCACCTTGAATCAAAAGAAATCAATACCTGGGAAATTCATTTCTGTTCAGATTTATAGTGGTACAGAAGTTGATCCTAATACTGGTAAAGGGTGGTTGAGTGAGAAAGCATATTTTAAGGAAAGTGGTAGCAAGAAACATCACCATGGTGACGATGTTGATGATGCACAAACAAAGGTTAAGACATATAAAATTAAACTACAGGTTGAATCACATTTTGGAACTCCAAGAGCTTTTGTAATTCAAAACAAACAAAACAGGAAATTCTATCTTCTGTCTGCATCTATTGAGACTTGTACCAATAGAATCATTCACTTTGATTGCAATTCTTGGATTTATCCAATCAAGAAAACCAAATTTGATAGACTATTCTTCTCAAATAGATGCTATCTTCCAAGTCAAACACCTAGAGCATTAGCGGAACTAAGAAAAGAAGAGCTTGATAAATTGAGAGGTAATGGAATGGGAGAAAGAAAGGAATGGGATAGAATCTATGACTATGACTACTACAATGACCTTGGCGATCCTGGCAAAGGTTCGGAGCATTTTAGACCTATTTTGGGTGGTTCAAGGTTATATCCATATCCACGTCGAGTTAGAACAGGTCGGAAGCAAAATGCAACAGGTCCATCAACTGAGAGTAGACCACAAGCAACGAATTTTGATATATATGTTCCTTCAGATGAGATATTTAGCCCTAACAAATTGAAGGAGATCAAATCAAATTCTATCCAAGCCATTGTACATTTACTATCTTCAAAGACAGAATCATTACCTCAACAAAGTTCTCGAAGCTTTCAATCGTTTGAAGAGATACTTGACATGCTCTCTGCCAATAGAAACCAAACAATAGAAGGATTGATCAGAGACAACTTAAAGAAATTGGTACCAAATGAGTACTTAAGGGAAATAACTCGGTCAATCAAGGAAAACCATTGGCATGTTCTTATCCCTCGAATCATACATGAAAAAGAATGGGCTTGGAATGATGACATGGAGTTTGGAAGACAAATGCTTGCAGGAACACATCCTGTCCGAATCCAGTGCTTGATGACATTTCCACCTCAAAACAAATTTGGAGTACAGAGTTCAATTAAGCAATCAATCATAGAACAGATGCTTGAAGGATGGACGCTTCCTCAAGCTTTGGAACAAGGAAGAATATTCATGTTGGACCATCATGACTATCTCATGCCATATTTGAACAGAATAAATGCAAATGGGGTATCTGCTTATGCATCAAGAACACTTCTATTCTTGAGAAGTGATGGCATGCTTAAGCCACTGGCAATAGAACTCAGCTTGCCAGGATCCTCTCTAGCTCTTGAAATCCAAAGAGTTTTTCTTCCATCAAAGCAAGGGACACAAGCAGCACTTTGGCAGCTTGCTAAAGCTCATGTTTTAGCTAATGATGCTTTTTACCATATACTAATAAGCCATTGGTTATACACACATGCAGTTGTTGAACCATTTATCCTTGCTACCAAAAGAAGGCTAAGTGAAATGCATCCAATCCGTCGAATACTGAATCCTCATTTCAAAGACACCATGCATATAAATGCCTTGACTAGACTTATCCTTATTAACTCTGGAGGAATTCTTGAGAGAATGTTATTTCCTGGTGAAACTTGTATGCAAATAACCTGTGATCTCTATAAAGAGTGGAAATTTACTGAACAAGGACTTCCTGCTGATCTAATCAAAAGGGGCATGGCTTTAGAAGACCAAGATGAGAAAAGTTCAACTGGGATTCAACTTCTCATGTTGGACTATCCCTATGCTATTGATGGACTTGAAATATGGGTTGCCATCAAATCATGGGTCAGGGACTTCATCTCATTCTTCTACAAAGACAATGAAGCCATCATGGCTGATACTGAACTCCAAGCATGGTGGTCAGAGATTCGATCTATAGGCCACGGTGACAACCACAATGAGACATGGTGGTATCAAATGACAACACTCTCAGACCTTGTAGAAACACTAACAACTCTCATATGGATTTCCTCAGCTCGTCATGCAGTTATAAACCACCAAAAACATGCACAAAATGGTAATTACCCTCCTAATAATCCTACACTATGTAGAAAGTTCATTCCACTAGAAGGAACAGTTGAGTTTGGTGAGTTCCTCAAGGATCCTGATAAGTTCTTCATGAAGATGTTTCCTGACAGGTTTGAGACGAGTCTTGGTTTGACATTGGTAGATTTGCTATCAAAAAACAGTTATGATGAAGTGTACTTGTTGAGATGTCAACCATCACATGGTTGGATAGACAATGAAATTGTTCTGAACAGATTTGCTGAGTTCAAAGAAGAACTGAAGGAGATTCAGATAAGGGTTTTGCAAAGAAACAAAGATCCAAAGCTTAAGAATAGGCGTGGCCTTGCAAAAATTGATCACAATATTTTGTATCCTAAGATGCCTAGTTCTGGATCAAGAAGATGGAATCATGGGAAGAGGAGTGTCTTATAA 2607 0.3809 MEASKRPSSCISKWQYSSTKSKIVSNFNPVCQAVQKLTLKGKFVITLNQKKSIPGKFISVQIYSGTEVDPNTGKGWLSEKAYFKESGSKKHHHGDDVDDAQTKVKTYKIKLQVESHFGTPRAFVIQNKQNRKFYLLSASIETCTNRIIHFDCNSWIYPIKKTKFDRLFFSNRCYLPSQTPRALAELRKEELDKLRGNGMGERKEWDRIYDYDYYNDLGDPGKGSEHFRPILGGSRLYPYPRRVRTGRKQNATGPSTESRPQATNFDIYVPSDEIFSPNKLKEIKSNSIQAIVHLLSSKTESLPQQSSRSFQSFEEILDMLSANRNQTIEGLIRDNLKKLVPNEYLREITRSIKENHWHVLIPRIIHEKEWAWNDDMEFGRQMLAGTHPVRIQCLMTFPPQNKFGVQSSIKQSIIEQMLEGWTLPQALEQGRIFMLDHHDYLMPYLNRINANGVSAYASRTLLFLRSDGMLKPLAIELSLPGSSLALEIQRVFLPSKQGTQAALWQLAKAHVLANDAFYHILISHWLYTHAVVEPFILATKRRLSEMHPIRRILNPHFKDTMHINALTRLILINSGGILERMLFPGETCMQITCDLYKEWKFTEQGLPADLIKRGMALEDQDEKSSTGIQLLMLDYPYAIDGLEIWVAIKSWVRDFISFFYKDNEAIMADTELQAWWSEIRSIGHGDNHNETWWYQMTTLSDLVETLTTLIWISSARHAVINHQKHAQNGNYPPNNPTLCRKFIPLEGTVEFGEFLKDPDKFFMKMFPDRFETSLGLTLVDLLSKNSYDEVYLLRCQPSHGWIDNEIVLNRFAEFKEELKEIQIRVLQRNKDPKLKNRRGLAKIDHNILYPKMPSSGSRRWNHGKRSVL 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04504 868 SUPERFAMILY Lipoxigenase 175 852 IPR036226 -
Mepo1g04504 868 Coils Coil 804 824 - -
Mepo1g04504 868 Gene3D - 517 860 - -
Mepo1g04504 868 ProSiteProfiles PLAT domain profile. 56 170 IPR001024 GO:0005515
Mepo1g04504 868 Gene3D PLAT/LH2 domain 22 192 - -
Mepo1g04504 868 PANTHER LIPOXYGENASE 41 854 IPR000907 GO:0016702|GO:0034440|GO:0046872
Mepo1g04504 868 Gene3D - 389 515 - -
Mepo1g04504 868 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 174 IPR036392 GO:0005515
Mepo1g04504 868 Gene3D - 193 296 - -
Mepo1g04504 868 Gene3D - 298 388 IPR027433 -
Mepo1g04504 868 PRINTS Plant lipoxygenase signature 166 187 IPR001246 GO:0016491
Mepo1g04504 868 PRINTS Plant lipoxygenase signature 205 221 IPR001246 GO:0016491
Mepo1g04504 868 PRINTS Plant lipoxygenase signature 238 257 IPR001246 GO:0016491
Mepo1g04504 868 PRINTS Plant lipoxygenase signature 456 480 IPR001246 GO:0016491
Mepo1g04504 868 PRINTS Plant lipoxygenase signature 779 793 IPR001246 GO:0016491
Mepo1g04504 868 PRINTS Plant lipoxygenase signature 140 158 IPR001246 GO:0016491
Mepo1g04504 868 Pfam Lipoxygenase 183 850 IPR013819 GO:0016702|GO:0046872
Mepo1g04504 868 ProSitePatterns Lipoxygenases iron-binding region signature 2. 546 556 IPR020834 GO:0016702|GO:0046872
Mepo1g04504 868 PRINTS Lipoxygenase signature 539 559 IPR013819 GO:0016702|GO:0046872
Mepo1g04504 868 PRINTS Lipoxygenase signature 501 518 IPR013819 GO:0016702|GO:0046872
Mepo1g04504 868 PRINTS Lipoxygenase signature 519 536 IPR013819 GO:0016702|GO:0046872
Mepo1g04504 868 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 173 858 IPR013819 GO:0016702|GO:0046872
Mepo1g04504 868 SMART LH2_4 39 171 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04504 Mepo-Chr1 52797103 52803958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04504 37 850 Acyl Lipid Metabolism Gene Families AT3G22400 43.201 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04504 K00454 - gmx:100797946 1319.29