Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04475 ATGTCTTCCTCCACTGATCATCCATGGATTTATGACGTGTTCATAAGTTTCAGAGGAGAGGATACTCGCAAGACTTTTGTCTCTCATCTCTATGCTGCACTCAAAAACTCAGGAGTCAAAACTTTTGTTGATGATGAAGAGCTTAGAAAGGGAAAACAGCTAGGACCAGAACTAGAGAGAGCAATAGAAGGGTCTCAGATATCTATTGTTGTTCTCTCACCCAACTATGCAGGATCTAGCTGGTGTCTTAATGAACTTGTAAATATCATGGAATGCTGTAAAACTCATGGCCAGTTGGTTATACCCCTCTTTTACCATGTTGACCCATCGGTTGTCCGTAAGCAGTCCGCTGAGTTTGGAAAAATCTTGAAAGTTACTGCAAGAAAAAAAGAAGTTCTCATGTCCAAGTGGCGGAAGGCACTCAACGATGTTGCAAATCTATCCGGCTGGGATGCCAAAAATATCAGGTAA 471 0.4183 MSSSTDHPWIYDVFISFRGEDTRKTFVSHLYAALKNSGVKTFVDDEELRKGKQLGPELERAIEGSQISIVVLSPNYAGSSWCLNELVNIMECCKTHGQLVIPLFYHVDPSVVRKQSAEFGKILKVTARKKEVLMSKWRKALNDVANLSGWDAKNIR 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04475 156 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 150 IPR035897 -
Mepo1g04475 156 Gene3D - 8 156 IPR035897 -
Mepo1g04475 156 Pfam TIR domain 11 148 IPR000157 GO:0007165
Mepo1g04475 156 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 156 - -
Mepo1g04475 156 ProSiteProfiles TIR domain profile. 9 156 IPR000157 GO:0007165
Mepo1g04475 156 PANTHER TMV RESISTANCE PROTEIN N-LIKE 3 154 - -
Mepo1g04475 156 SMART till_3 10 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04475 Mepo-Chr1 52532268 52532738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04475 10 149 Miscellaneous Gene Families AT1G57670 41.844 1.28e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04475 - - tpra:123923859 210.305