Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04461 ATGAAAGCAAAGACTATGGTTGTGATTTTTCTATTTGTCTTCTCTTCCTTATTCACTATATCAAGTGCAGAAATCTCAGGACAACCAGGAGTGAACTATGGACAACTAGGAAACAACCTTCCAACACCAACAACCTCAGTATCTCTCATCAAAAACCTCAAAGCCAAACGTGTCAAAATCTATGACGCAAATCCACAAATCCTCAAAGCCCTTGAAAACACTGGAATCCAAGTATCCATCATGCTCCCCAATGAACTTGTAACAAATGTATCCTCAAACCAAACACTTGCAAATCAATGGGTCCAAACCAACCTCGTACCCTTCTACTCAAAAACACTCATTCGTTATCTTCTTGTTGGTAATGAACTCATTTCCTCAACAACAAACCAAACATGGCCCCACATTGTACCTGCCATGCAGAGAATGAAACACTCCTTAACTATCTTTGGTTTGCATAAAGTCAAAGTTGGAACACCTTTGGCAATGGATGTTTTACAAACATCATTTCCACCTTCAAATGGCACATTTAGAAATGACATTGCGTTGAGTGTTATGAAACCAATGTTAGAGTTTTTACATGTCACAAACTCTTTTTTCTTCTTAGATGTGTATCCATTTTTTGCTTGGACATCAGATCCTATTAATATTAACTTGGAATATGCTCTTTTTGAGTCCGATAACATCACGGTTACAGATTCGGGTACGGGTTTGGTTTATACTAATTTGTTTGATCAAATGGTGGATGCGGTGTATTTTGCAATGGAGCGACTTGGGTATCCGAATATTCATATATTTATCGCTGAAACGGGTTGGCCTAATGATGGTGACTTGGACCAAATTGGTGCGAATATTCACAATGCCGGTACATATAATAGAAACTTCGTGAAAAAGGTTACCAAAAAACCTCCGGTTGGGACACCAGCTCGACCAGGTTCAATTCTTCCGTCTTTTATATTTGCTTTGTACAATGAGAACTTGAAACCGGGTTTGGATACAGAGCGTCACTTTGGGCTATTGTACCCGAATGGGTCAAGTATTTACGAGATTGACCTTTCTGGAAAGACGCCGAAGTCAGAGCTTAAGCCATTGCCGCCACCAGATGATTATAAAGGGAAGGCGTGGTGTGTGGTGGTGGAAGGAGCTAACAAGACAGCGGTAGTGGAAGCATTGTCATATGCTTGCTCACAAGGGAACCGAACATGTGAATCGGTTCAACCCGGAAAACCCTGTTTTGAACCCGATTCAGTTGTTGGTCATGCTAGCTATGCGTTTAGTTCTTACTGGGCTCAGTTTAGGCGTGTAGGTGGTACTTGCAACTTCAATGGTCTCGCCACTCAAACTGCAGAGGATCCAAGTTATGGATCTTGCAAATACCCAAATGTGATTCTTTGA 1392 0.4109 MKAKTMVVIFLFVFSSLFTISSAEISGQPGVNYGQLGNNLPTPTTSVSLIKNLKAKRVKIYDANPQILKALENTGIQVSIMLPNELVTNVSSNQTLANQWVQTNLVPFYSKTLIRYLLVGNELISSTTNQTWPHIVPAMQRMKHSLTIFGLHKVKVGTPLAMDVLQTSFPPSNGTFRNDIALSVMKPMLEFLHVTNSFFFLDVYPFFAWTSDPININLEYALFESDNITVTDSGTGLVYTNLFDQMVDAVYFAMERLGYPNIHIFIAETGWPNDGDLDQIGANIHNAGTYNRNFVKKVTKKPPVGTPARPGSILPSFIFALYNENLKPGLDTERHFGLLYPNGSSIYEIDLSGKTPKSELKPLPPPDDYKGKAWCVVVEGANKTAVVEALSYACSQGNRTCESVQPGKPCFEPDSVVGHASYAFSSYWAQFRRVGGTCNFNGLATQTAEDPSYGSCKYPNVIL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04461 463 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Mepo1g04461 463 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 447 IPR044965 GO:0004553|GO:0005975
Mepo1g04461 463 FunFam Glucan endo-1,3-beta-glucosidase 14 28 356 - -
Mepo1g04461 463 Pfam X8 domain 374 445 IPR012946 -
Mepo1g04461 463 SUPERFAMILY (Trans)glycosidases 30 350 IPR017853 -
Mepo1g04461 463 FunFam Glucan endo-1,3-beta-glucosidase 4 368 462 - -
Mepo1g04461 463 Gene3D - 369 460 - -
Mepo1g04461 463 SMART X8_cls 373 458 IPR012946 -
Mepo1g04461 463 Pfam Glycosyl hydrolases family 17 30 350 IPR000490 GO:0004553|GO:0005975
Mepo1g04461 463 Gene3D Glycosidases 29 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04461 Mepo-Chr1 52368819 52371665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04461 25 463 Glycoside Hydrolase AT3G23770 54.382 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04461 - - ccaj:109805358 719.924