Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g04423 | ATGTATGCTGATCGGGTGGAAAGTGGAGCAAGGAGGTCTGTCAAAGAGCGTCTGGATGGAAGCATCAGTGTGTCTACTCGGAATCAACGTCAAGTTACTGGCAAAAGGCCGAGGCAAGATGACAAGTGGGAACACGATCTTTATGATGATGATGTTGAACAAGAACAACCGCGGACCACTAATCGCAAAGTTACTGGTCAAGATCTCCGTCTTAAGCTTCAAAAGAAAGGTCTTCAACCTGCAACTCGGAGTGGAAAGAGTTCTACTCCAAGCACCCGGGATCTTCGTGAAAGACTATCAGGGACAATGAATACACAACCTAAAAACTCCGACCCACCAAAGTCAAAAGTGATTGCTAAACCGAGCAGTAAAAGTGTTGGTGCTGAGGCTCCTGCAGTCAAAAGACCAGCTAACCCAGCTCCTAAAAAGGCACGGAAGGCTGGTACTACAGTTGATGAATTTTTGCTGACCTTGGGTCTCGAAAAGTATCTCATAACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAAACATATGACCGATGAGGACCTCAAGGTTATGGGTATACCAATGGGGCCAAGAAAGAAGATACTTTTAGCGTTGGAGTCAAAAGTCTGA | 621 | 0.4541 | MYADRVESGARRSVKERLDGSISVSTRNQRQVTGKRPRQDDKWEHDLYDDDVEQEQPRTTNRKVTGQDLRLKLQKKGLQPATRSGKSSTPSTRDLRERLSGTMNTQPKNSDPPKSKVIAKPSSKSVGAEAPAVKRPANPAPKKARKAGTTVDEFLLTLGLEKYLITFQAEEVDMTALKHMTDEDLKVMGIPMGPRKKILLALESKV | 206 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g04423 | 206 | SMART | SAM_4 | 143 | 206 | IPR001660 | GO:0005515 | |
| Mepo1g04423 | 206 | ProSiteProfiles | SAM domain profile. | 146 | 206 | IPR001660 | GO:0005515 | |
| Mepo1g04423 | 206 | MobiDBLite | consensus disorder prediction | 33 | 58 | - | - | |
| Mepo1g04423 | 206 | Gene3D | - | 148 | 206 | IPR013761 | - | |
| Mepo1g04423 | 206 | MobiDBLite | consensus disorder prediction | 80 | 112 | - | - | |
| Mepo1g04423 | 206 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Mepo1g04423 | 206 | PANTHER | SCP160 | 112 | 202 | - | - | |
| Mepo1g04423 | 206 | CDD | SAM_superfamily | 151 | 203 | - | - | |
| Mepo1g04423 | 206 | MobiDBLite | consensus disorder prediction | 1 | 147 | - | - | |
| Mepo1g04423 | 206 | Pfam | SAM domain (Sterile alpha motif) | 150 | 203 | IPR001660 | GO:0005515 | |
| Mepo1g04423 | 206 | SUPERFAMILY | SAM/Pointed domain | 149 | 203 | IPR013761 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo1g04423 | Mepo-Chr1 | 51827503 | 51832876 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo1g04423 | 38 | 205 | Glycosyltransferase | AT3G07170 | 58.580 | 4.42e-60 | 184 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo1g04423 | - | - | gmx:100784706 | 280.026 |