Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04356 ATGGGTAGTTCTGAAGGGTTAGGAGCATCTTCAAAGCCTGCGAATTCTTCTTCGCAGGCCGTGCCGGAGAAACAATATGGTGTCACAAAGGCTATTTCAATGGCTTGTCCAACAAGTGCTGATAGGAAAAGGACTCAACAATTGGAGAAGTTTCTCATTGATTCGGGGTTGTATGAGAGCAAGGAGGACGCTGACAAGAGGGTAGAGGTTCTTCATAGACTTGGACAGATAGTAAAAAGTTGGGTAAAGCACCTTACTCGCCTGAAAGGGTACACTGATCAAATGGTGGAAGATGCAAATGCTGTCATTCTCACATTTGGTTCTTATCGTCTTGGCGTTCATGGACCTGGTGCCGACTTGGATACACTGTGTATTGGGCCATCCTATGTGAACCGAGAGGAGGATTTTTTCTACACGTTGCATGATATCCTGGCTAGCGTGGATGAAGTTACTGAACTACAACCAGTTCCGGACGCTCATGTACCAGTTATGAAGTTCAAGTTTGACGGAATTTCGATCGACCTTCTTTATGCAAGTATATCTTGCTTGATTGTACCTGAAGAATTGGATATATCTGATGTCTCTGTTCTACACAATGTTGATGAGCCTACTGTTCGAAGTTTGAATGGTTGTAGAGTCGCAGATCAAATTCTAAAGCTTGTTCCAAACGTTGAGTACTTTCGAACAACACTCCGGTGCTTGAAGTTTTGGGCCCAAAGACGAGGTGTTTATTCCAATGTCACAGGTTTCCTCGGTGGTGTTAACTGGGCACTTCTTGTAGCTCGAGTATGCCAGTTGTATCCAAATGCAGTTCCAAGCATGCTTGTCTCTCGATTCTTTAGGGTATATACACAGTGGCGTTGGCCAAATCCTGTCATGTTATGTTCGATAGAGGAGAACGAGCTTGGGTTTTCCGTGTGGCATCCTCTTAGAAATCCTCGTGATCGATCTCATCTTATGCCAATCATAACTCCCGCATATCCGTGCATGAATTCAAGTTATAATGTTTCTGCAAGCACACTTCGAGTTATGATGGAGCAGTTCCAATATGGCAACAAAATCTGTGGGGATATTGAACTGAATAAAGTCAGCTGGAGTGCTCTCTTTGAACCATATGTTTTCTTTGAAGGCTACAAAAACTTTCTGCAAATTGACATAGTAGCTGCTGATGTTGATGACTTGCGTGCTTGGAAAGGTTGGGTGGAATCACGCCTTCGGCAGCTGACTTTGATGATTGAGCGTGATACGATTGGGAAGTTGCAGTGCCATCCTTATCCTTGGGAGTATATTGATAATTCAAGGAAATGTTCACATAGTGCCTTCTTCATGGGCTTGCAGAGGAAACAGGGGGAGGTTGTTCAAGAAGGCCAGCAGTTTGATATACGCGGAACTGTTGAAGCATTTCGGCATTCTATTAATATGTACATGTTCTGGAAACCTGGGATGGACATTCATGTTTCACACATCCGTAGAAGGCAAATCCCTTGCTATGCGTTTCCTGATGGTTTTAAACGATCTCGACCATCAAGGTCAACAGCACCAGTGGAGAATCGTCCAAAATCACTTCAAGAAAATGAGGTTTCTGGGACTGAACTTCGTGGGAGGAACATCAAGAGGAAGTATGATGACAAGGGGGTGAAGCAAGATGTTGTACTGAAAAAACATTGCGCCAGTCCTTCTGCGGAGAGCTTGACAACTGGCAACTCGTGCCTTGGTGCTGGTGGCATGTCTGTTGATGCTGAATCTGATTTTCAAGAGTTGAAGAGTGGTGAGAGTATGAGTTTGACCAATAGTGAGCAAGATGAGTTGGATAGAAGAATGTCTCCAGAAGCTGGGACTGAATGTGGATCAAATTCTAGTGGGGTCACATCTGTTTCGAGTGAAGATGGCTCTCCCGAATATGTTGCGTCTGTATCAGTGGCAGGGTATGTTGATAATAGCGCCAGGGCTGTTGAGGCAATGAACAACAGTAGATTCGATACCACCACCTACAGTGGAATAGGTACACTGTCCAGTGCAAACAATGAAGTATTACAAGACACACTACAGACACATTTGGAGCCAATTGCAATGGCAGGGATGTTTCTTGATTCTACCAAGGAAAGCTTTGACTCAGAAGCTGTTCCAAAGACAGTAATAAGGAGACTGAGTCTAACATCGATGGCGTGA 2169 0.4426 MGSSEGLGASSKPANSSSQAVPEKQYGVTKAISMACPTSADRKRTQQLEKFLIDSGLYESKEDADKRVEVLHRLGQIVKSWVKHLTRLKGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILASVDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEYFRTTLRCLKFWAQRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICGDIELNKVSWSALFEPYVFFEGYKNFLQIDIVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPWEYIDNSRKCSHSAFFMGLQRKQGEVVQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYAFPDGFKRSRPSRSTAPVENRPKSLQENEVSGTELRGRNIKRKYDDKGVKQDVVLKKHCASPSAESLTTGNSCLGAGGMSVDAESDFQELKSGESMSLTNSEQDELDRRMSPEAGTECGSNSSGVTSVSSEDGSPEYVASVSVAGYVDNSARAVEAMNNSRFDTTTYSGIGTLSSANNEVLQDTLQTHLEPIAMAGMFLDSTKESFDSEAVPKTVIRRLSLTSMA 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04356 722 CDD NT_PAP_TUTase 66 221 - -
Mepo1g04356 722 SUPERFAMILY PAP/OAS1 substrate-binding domain 222 371 - -
Mepo1g04356 722 MobiDBLite consensus disorder prediction 510 530 - -
Mepo1g04356 722 Pfam Poly(A) polymerase predicted RNA binding domain 374 432 IPR007010 GO:0003723|GO:0043631
Mepo1g04356 722 FunFam Putative poly(A) polymerase gamma 194 369 - -
Mepo1g04356 722 Gene3D Poly(A) polymerase predicted RNA binding domain 373 489 - -
Mepo1g04356 722 MobiDBLite consensus disorder prediction 587 630 - -
Mepo1g04356 722 Pfam Poly(A) polymerase central domain 27 371 IPR007012 GO:0043631|GO:1990817
Mepo1g04356 722 MobiDBLite consensus disorder prediction 505 534 - -
Mepo1g04356 722 Gene3D Beta Polymerase, domain 2 59 215 IPR043519 -
Mepo1g04356 722 PANTHER POLY A POLYMERASE 15 531 - -
Mepo1g04356 722 Pfam Nucleotidyltransferase domain 100 175 IPR002934 GO:0016779
Mepo1g04356 722 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 374 499 IPR011068 GO:0003723|GO:0016779|GO:0031123
Mepo1g04356 722 FunFam Nuclear poly(A) polymerase 4 373 489 - -
Mepo1g04356 722 MobiDBLite consensus disorder prediction 612 630 - -
Mepo1g04356 722 FunFam Poly(A) polymerase alpha, putative 59 215 - -
Mepo1g04356 722 MobiDBLite consensus disorder prediction 1 23 - -
Mepo1g04356 722 Gene3D - 27 369 - -
Mepo1g04356 722 SUPERFAMILY Nucleotidyltransferase 24 220 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04356 Mepo-Chr1 51205225 51209929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04356 K14376 - gmx:100783237 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04356 1 51205225 51209929 Mepo1g04356 1 51205225 51209929 ECH