Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04349 ATGGCTATGCCTAACATGAGTAACTACCACCTTCCTCCTTCAATACGTGTCATTTTCGGGATTGCCATATATACTGAGCATACACTGAAGAAATACTTAACTCACCAAAAGCAGAAAATGATGAACATGAATAGAAAAGTAACACTTGTTCTACTCATAGTATCTTGCTTCCTAACTTGTGGTAGCTTTGCACAAGATACACTTGTACCTGCTATCATGACATTTGGTGACTCAGCAGTGGATGTAGGAAATAATGACTACCTTCCTACTCTTTTTAAGGCTGATTACCCTCCTTATGGAAGAGATTTTGCTAATAAACAACCTACTGGGAGGTTTTGCAATGGCAAGTTAGCTACTGATTTTACAGCTGATACACTTGGTTTTACGAGTTATGCTCCGGCATATCTTAGTCCACAGGCATCAGGGAAGAACCTCCTTCTTGGAGCAAATTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTACGTTGAATCATGCAATTCCATTGTCCCAACAGTTAGAATATTTCAAGGAGTATCAAGGCAAGTTAGCTCAGGTTGCTGGCAGTAAAAAGGCTGCATCAATTATCAAGGATTCTTTGTATGTATTGAGTGCTGGCAGCAGTGACTTTTTGCAAAATTATTATACCAATCCTTGGATCAACAAAGTAGTCACTGTTGATCAGTATTCATCTTACCTATTAGACTCATTCACAAGCTTTATTAAGGGCGTGTATGGATTAGGAGCCAGGAAAATTGGAGTGACTTCACTTCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTACAATGAGAATGGTTGTGTCTCAAGAATCAACACTGATGCACAAGGATTTAACAAGAAAGTCAGCTCAGCTGCATCAAATCTTCAAAAGCAACTTCCTGGTCTTAAGATTGTGATTTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAAAACCCTTCAAATTTCGGTTTTGCTGAGGCAGGAAAAGGGTGCTGTGGTACAGGACTTGTAGAAACAACATCATTGTTGTGCAATCCAAAATCACTAGGAACTTGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTTCATCCTTCAGAAGCTGCTAATCAAGTTCTAGCTGATAATTTAATCATAGCAGGCATAGCTCTTATCACATAA 1185 0.3941 MAMPNMSNYHLPPSIRVIFGIAIYTEHTLKKYLTHQKQKMMNMNRKVTLVLLIVSCFLTCGSFAQDTLVPAIMTFGDSAVDVGNNDYLPTLFKADYPPYGRDFANKQPTGRFCNGKLATDFTADTLGFTSYAPAYLSPQASGKNLLLGANFASAASGYDEKAATLNHAIPLSQQLEYFKEYQGKLAQVAGSKKAASIIKDSLYVLSAGSSDFLQNYYTNPWINKVVTVDQYSSYLLDSFTSFIKGVYGLGARKIGVTSLPPLGCLPAARTLFGYNENGCVSRINTDAQGFNKKVSSAASNLQKQLPGLKIVIFDIYKPLYDLVQNPSNFGFAEAGKGCCGTGLVETTSLLCNPKSLGTCSNATQYVFWDSVHPSEAANQVLADNLIIAGIALIT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04349 394 PANTHER GDSL ESTERASE/LIPASE EXL3 54 385 - -
Mepo1g04349 394 Gene3D SGNH hydrolase 60 388 IPR036514 -
Mepo1g04349 394 CDD SGNH_plant_lipase_like 70 386 IPR035669 -
Mepo1g04349 394 FunFam GDSL esterase/lipase APG 62 389 - -
Mepo1g04349 394 SUPERFAMILY SGNH hydrolase 72 385 - -
Mepo1g04349 394 Pfam GDSL-like Lipase/Acylhydrolase 72 384 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04349 Mepo-Chr1 50976404 50979500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04349 68 385 Acyl Lipid Metabolism Gene Families AT4G10950 31.562 3.66e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04349 - - gmx:100793645 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04349 1 50976404 50979500 Mepo1g04349 1 50976404 50979500 ECH