Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04326 ATGTCTTCTTCCTTCAAATTCATCTCTTTCCAACTTTTCATCATCATATTACATGTCTTTGCTACAACATCCATTTTGTCATCAACAACTGATAACCTCTCATTCAACAATTTTCTAGACAGTGCCAAGAGTCCTGAGGTTTATGATTGGATGATCAATATCAGAAGGAAGATTCACCAGAATCCAGAATTGGGTTATCAAGAATTTGAGACAAGTAAACTGATAAGATCAAAATTGGATAAAATGGGCATCCCTTATAAACATCCAGTTGCAGTCACTGGTGTCATTGGCTTCATAGGAACTGGAAATCCTCCTTTTGTTGCTTTAAGAGCTGATATGGATGCTCTTTCTATGCAGGAAATGGGGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCACGCATGTGGTCACGATGCTCATGTTACAATGCTACTTGGTGCTGCAAAGATTCTCAAACAGCATGAAGAAGAAATACAAGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGCAGGGGCTAAGAAAATTTTAGATTCTGGAGCACTAGAAAATGTTTCAGCTATCTTTGGATTGCATATTGATCCGGAATTACCAATAGGTGAGGTGGAATCTAGGTCTGGTCCTATACTCGCAGGAAGTGGCTTCTTTGAAGCAAAAATAAGTGGAAAAGGAGGTCATGCTGCTATTCCTCAACACTCTATAGATCCTATATTGGCAGCTTCCAATGTGATTATTAGCTTACAACAACTTGTTTCTCGTGAGGCTGATCCTTTAGACACCCAGGTTGTGACGGTTGCGAAGATCCAGGGAGGTAGTGCATTCAATGTTATTCCGGATCATGTCACAATTGGTGGTACCTTCCGAGCCTTTTCTAAACAAAGCTTCAACCAACTGAGACAGCGGATTGAGCAGGTTATCATTGGGCAAGCTGCTGTACAAAGGTGCAATGCAACTGTGGACTTCCTTGAAGAGTGGGAACCTTTCAATCCTCCAACTGTAAACAATGGTGACCTGCATGAGCATTTTGTGAATATTGCAGTGAATATGCTTGGCATCGATAAAGTTGGTGTCTTGACACCATCTATGGGAGCTGAAGATTTTTCATTCTATCAAGAGGTCATACCTGGTTACTTCTTCAATATTGGAGTGCATAATGCTTCACATAAACCATCTGAGTCAATATTACACTCACCTTATCTCAAAATCAATGAAGATGGACTTCCTTATGGGGCTGCACTACATGCATCTTTAGCTGCTAGTTATCTTCTCAAACATCAGCAGGATTTTGGTTTAAGCAATTATTAA 1320 0.4061 MSSSFKFISFQLFIIILHVFATTSILSSTTDNLSFNNFLDSAKSPEVYDWMINIRRKIHQNPELGYQEFETSKLIRSKLDKMGIPYKHPVAVTGVIGFIGTGNPPFVALRADMDALSMQEMGEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKQHEEEIQGTVVLVFQPAEEGGAGAKKILDSGALENVSAIFGLHIDPELPIGEVESRSGPILAGSGFFEAKISGKGGHAAIPQHSIDPILAASNVIISLQQLVSREADPLDTQVVTVAKIQGGSAFNVIPDHVTIGGTFRAFSKQSFNQLRQRIEQVIIGQAAVQRCNATVDFLEEWEPFNPPTVNNGDLHEHFVNIAVNMLGIDKVGVLTPSMGAEDFSFYQEVIPGYFFNIGVHNASHKPSESILHSPYLKINEDGLPYGAALHASLAASYLLKHQQDFGLSNY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04326 439 PANTHER PEPTIDASE M20 FAMILY MEMBER 20 434 IPR017439 GO:0016787
Mepo1g04326 439 Pfam Peptidase dimerisation domain 217 311 IPR011650 -
Mepo1g04326 439 Gene3D Zn peptidases 51 411 - -
Mepo1g04326 439 NCBIfam amidohydrolase 51 414 IPR017439 GO:0016787
Mepo1g04326 439 SUPERFAMILY Bacterial exopeptidase dimerisation domain 217 326 IPR036264 -
Mepo1g04326 439 SUPERFAMILY Zn-dependent exopeptidases 46 429 - -
Mepo1g04326 439 PIRSF Amidohydrol_AmhX 38 431 IPR017439 GO:0016787
Mepo1g04326 439 Gene3D - 216 334 - -
Mepo1g04326 439 CDD M20_IAA_Hyd 51 415 IPR044757 GO:0009850|GO:0016787
Mepo1g04326 439 FunFam N-acetyldiaminopimelate deacetylase 216 333 - -
Mepo1g04326 439 Pfam Peptidase family M20/M25/M40 108 422 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04326 Mepo-Chr1 50685183 50689541 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04326 K21604 - gmx:100789077 652.129