Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04290 ATGGCTATGCAACAATTCGATCAGTATTACCACTACCAACCAGACGAACGGAGCAACATCAACACACTCTTCGTCTCCGGTCTCCCAGACGACGTCAAAGCGCGTGAGATTCATAACCTCTTCCGCCGTCGTCCCGGTTTTGATTCTTGCCAACTAAAGTATACCGGCCGTGCTAATCAGGTTGTTGCTTTTGCTACGTTTTTCAATCATCAAGCAGCAATGCAAGCGTTACACTCCCTAAATGGTGTGAAATTTGATCCTCAATCTGGATCTGTTTTACATATTGAACTTGCCAGGTCAAACTCTAGGAGGAAGCGAAAACCAGGTGGTGAAGCTTACGTGGTTATAGACAAAAGGTCAAAGGGGGAAGCCAATGTTCAGGGATCGTCAAGTGATGATGGTGAAAGTGACCCTGATGAACCATCAGAAAATGGCAGTAACCATGGCGATATAGCAACCGCACAAAGTGGTGATGCAGTTGTTGGTTCTGACAATCATGTACCTGTGGCAAGGGCACAACATGGAAAGGGTGGTGATGATGGAGGACCATGTTCCACTCTTTTTATTGCCAATCTTGGTCCAAACTGCACTGAGGATGAATTAAAGCAAGCTTTATCTGTGTATGCTGGATTCAACTTGGTCAAAATGCGTTCTAGAGGAGGAATGCCTGTAGCATTTGCTGATTTTGAGGAAATTGATCAAGCTGTTAAGGTCATGGAGGAGCTTCAGGGAAGCTCACTTCCATCATCAGATCGGGGTGGCATGCACATAGAATATGCAAGGTCTAGAATGAGAAAGAAGCGATAG 807 0.4535 MAMQQFDQYYHYQPDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQAAMQALHSLNGVKFDPQSGSVLHIELARSNSRRKRKPGGEAYVVIDKRSKGEANVQGSSSDDGESDPDEPSENGSNHGDIATAQSGDAVVGSDNHVPVARAQHGKGGDDGGPCSTLFIANLGPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADFEEIDQAVKVMEELQGSSLPSSDRGGMHIEYARSRMRKKR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04290 268 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 185 262 IPR000504 GO:0003723
Mepo1g04290 268 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 140 262 - -
Mepo1g04290 268 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 100 IPR000504 GO:0003723
Mepo1g04290 268 SMART rrm1_1 22 96 IPR000504 GO:0003723
Mepo1g04290 268 SMART rrm1_1 186 258 IPR000504 GO:0003723
Mepo1g04290 268 MobiDBLite consensus disorder prediction 118 154 - -
Mepo1g04290 268 FunFam RNA-binding protein with multiple splicing 177 267 - -
Mepo1g04290 268 FunFam RNA-binding protein with multiple splicing 2 18 108 - -
Mepo1g04290 268 Gene3D - 16 103 IPR012677 -
Mepo1g04290 268 SUPERFAMILY RNA-binding domain, RBD 21 246 IPR035979 GO:0003676
Mepo1g04290 268 Gene3D - 180 268 IPR012677 -
Mepo1g04290 268 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 86 IPR000504 GO:0003723
Mepo1g04290 268 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 187 249 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04290 Mepo-Chr1 50299385 50305572 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04290 - - mtr:25500436 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04290 1 50299385 50305572 Mepo1g04290 1 50299385 50305572 ECH