Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04278 ATGGCAAATAGTGAGACTTGTTGTTCAACTCAGCTTATTGATGGAGATGGATTATTCAATGCTTCTGGGATCGAAAAGTTTATGAAGGAAGTGAAATTGGGTGAATGTGGGCTTTCATATGCTGTAGTTTCTATTATGGGGCCACAGAGTAGTGGCAAGAGCACACTATTAAATAATTTGTTTCATACAAATTTCAGAGAGATGGATGCCTTTAAGGGAAGGTCTCAAACAACCAAAGGTATCTGGATGGCCAGATGTGCTGGCATAGAGCCTTGTACCCTTGTGATGGATTTGGAGGGTACAGATGGAAGGGAACGTGGAGAGGATGATACTGCATTCGAAAAGCAGAGTGCTCTGTTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTTTTGAAAACTGTCTTTCAGGTTATGATGAGATTGTTTAGTCCACGCAAAACAACACTGTTGTTTGTCATACGTGATAAAACAAGGACACCACTTGAAAATCTAGAACCTGTTTTGAGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCCCACAAGGATACCCCACTGAGTGAATTTTTCAACGTTGAAGTTGTTGCGCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAGAGAGCAGGTTGCCAGCTTGAGGCAACGTTTCAATCAGTCTATTGCTCCTGGTGGACTTGCAGGGGATCGGCGTGGAGTAGTTCCTGCTTCTGGATTTTCTTTTAGTGCTCAGGAAATATGGAAAGTCATTAAGGAAAACAAAGATCTTGACCTTCCTGCACACAAGGTTATGGTTGCAACTGTACGATGTGAAGAAATTGCCAATGAGAAATATGCCGCTTTTGTCACAAATGAGGAATGGTGTCAATTGGAAGAGACTGTGCAATCTGATCCTATTCCTGGATTTGGGAAAAAAATCAATTCACTTCTTCATGCTTGTTTGTCGGAGTATGATGCTGAGGCCACTTATTTCGATGAAGGTGTTAGAACTGCAAAACAAAAGCAACTTCAAGAAAAATTGTTGCAACTTGTCCAACCAGCTTACCAATCTGCACTGGGACATATTAGATCTGTAACTTTGGATAAATTCAAGGAGACATTTGAAAAGGCTTTGAAAGGCGGGGAAAGGTTTTCTGCAGCTGCTAATAATTGCATTGAGTCTTGTGTGGATCAATTTGATAAAGCATGTGCAGATGTTGTTATTGAACTAACAAATTGGGATACATCTAAAGTACGAGAGAAACTGCTGCGTGATATTGATGCACATGTTGCATCTGTGCGTGAAACTAAGATTTCTGAACTTACTTCTTCATATGAGGAAAAACTGAAAGTATCTTTGTCTGGACCTGTCGAAGCTCTTTTAGATGGAGCTAATAGTGATACTTGGCCATCAGTAAGGAGCCTTCTTAAGCGTGAGATTCAATCATCTGTTTTAGGGTTTTCTGCTGCGCTTAATGGGTTTGATATGGATGAAGAAACAAGACAAAACATGATTTTGAGTTTAGAGGATTATGCAAGGGGTGTGGTAGAAGGAAAGGCTAGGGAAGAAGCTGGAAGGGTATTGATCCGTATGAAGGACAGGTTTACAATGTTATTTAGCCATGACTCTGATTCAATGCCTCGTGTTTGGACGGGGAATGAAGATATTCGAGCCATCACTAAAACTGCCCGCTCTGCTTCTTTGAAGTTGCTATCTGTTATGGCAGCACTTCGTTTGGATGATGGTGATAAAGATGATATTGAGAAAACATTGAAAGTTGCATTGCTGGATTCATCAAGCAGTGCTAATATAAGTAAGAGCATCACAGCGGTTGATCCGCTAGCTACTAGCAGTTGGGAACAGATTCCATCATCTAAGACATTAATTACACCTGTCCAGTGCAAAACTTTGTGGAGGCAATTCAAGATGGAGACAGAGTACAGTGTTTCTCAAGCCATTTCTGCACAGGAGGCCAACAAGCGTCATAACAACTGGTTACCTCCCCCATGGGCAATACTTGCTTTGGTTATTCTGGGATTCAATGAATTTATGACCCTTCTAAAAAATCCCTTGTATTTGGGTGTCATCTTTGTTGGTTTTCTTCTCATTAAAGCCCTGTGGGTGCAACTTAACATTGCCGGTGAATTTCGTCATGGAGTACTTCCCGGAGTCATTTCCTTGGCTACCAAGTTAGTTCCAACTATCATGAACCTTATGAAAAGACTAGCAGAAGAGGGAAATAACCCTGCAGCTAACAATCCTCAGAGACACACATCACAAAACAACACCAATGCCGTTCCTGTTGGCAGTTCTGTTTCATCTAGTTCTTCATCTAACATAACCGCATTGGAAAATGGAAATCGATATACCAGTTCATCAAAAGATGAATAA 2436 0.4101 MANSETCCSTQLIDGDGLFNASGIEKFMKEVKLGECGLSYAVVSIMGPQSSGKSTLLNNLFHTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKDTPLSEFFNVEVVALSSYEEKEEQFREQVASLRQRFNQSIAPGGLAGDRRGVVPASGFSFSAQEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFVTNEEWCQLEETVQSDPIPGFGKKINSLLHACLSEYDAEATYFDEGVRTAKQKQLQEKLLQLVQPAYQSALGHIRSVTLDKFKETFEKALKGGERFSAAANNCIESCVDQFDKACADVVIELTNWDTSKVREKLLRDIDAHVASVRETKISELTSSYEEKLKVSLSGPVEALLDGANSDTWPSVRSLLKREIQSSVLGFSAALNGFDMDEETRQNMILSLEDYARGVVEGKAREEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGNEDIRAITKTARSASLKLLSVMAALRLDDGDKDDIEKTLKVALLDSSSSANISKSITAVDPLATSSWEQIPSSKTLITPVQCKTLWRQFKMETEYSVSQAISAQEANKRHNNWLPPPWAILALVILGFNEFMTLLKNPLYLGVIFVGFLLIKALWVQLNIAGEFRHGVLPGVISLATKLVPTIMNLMKRLAEEGNNPAANNPQRHTSQNNTNAVPVGSSVSSSSSSNITALENGNRYTSSSKDE 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04278 811 Gene3D - 19 246 IPR027417 -
Mepo1g04278 811 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Mepo1g04278 811 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Mepo1g04278 811 Coils Coil 218 238 - -
Mepo1g04278 811 MobiDBLite consensus disorder prediction 763 804 - -
Mepo1g04278 811 PANTHER PROTEIN SEY1 5 776 IPR008803 -
Mepo1g04278 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 249 IPR027417 -
Mepo1g04278 811 CDD GBP 36 239 - -
Mepo1g04278 811 MobiDBLite consensus disorder prediction 761 811 - -
Mepo1g04278 811 Hamap Protein SEY1 [SEY1]. 9 765 IPR008803 -
Mepo1g04278 811 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Mepo1g04278 811 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04278 Mepo-Chr1 50200690 50210288 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04278 K22698 - gmx:100777656 1358.97