Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04254 ATGACTATATTCTCTACTATGTGGCTATTGCCTCTCTTTACTTTCATTTATGTCAATGGTATTCTTCCTATTGAAGCTACTCACCATGTTTATAGAAACCTTCAGAGTTTATCTTCTGATGATTCCTTCAAACAACCTTACAGAACTGCCTATCATTTCCAACCTCCAAAGAATTGGATAAATGATCCTAACGGACCATTGAGTTACAAAGGACTTTATCATCTATTCTACCAATACAATCCTAAAGGTGCAGTTTGGGGAAATATTGTATGGGCACATTCAGTTTCAACTGATCTTGTTAACTGGACCCCACTAGATCCAGCCATCTTTCCATCTCAACCGTTCGATATAAATGGTTGTTGGTCAGGATCAGCCACAATACTTCATGGTAACAAACCAGCTATTTTATACACTGGAATTGACCCCATGAATCACCAAGTTCAAAATATAGCATACCCTAAAAATTTATCTGACCCTTTTCTAAGGGAATGGATTAAGTCACCGAAAAATCCATTAATGGAACCAACTAGTGAAAATAAAATTAATGCTAGTTCATTTAGAGATCCAACTAGTGGTTGGTTAGGAAAAGATGGAAATTGGAGGATAATTATTGGTAGCAAAAGAAACACTAGGGGAATTGCAATTTTGTATAAGAGTAAAGATTTTATTAATTGGATTAAATCAAAACACCCTTTGCATTCAGCTAAAGGCACTGGAATGTGGGAGTGTCCTGATTTTTTTCCTGTTTTGAAAATTGGTACATTTGGTGTTGACACGTCATTAAATAGCGACGATGTTAGGCATGTGTTGAAGGTTAGTTTGGATGATAAAAAACATGATTATTATCTCATTGGGACTTATAATGATGATAAAGACAAATTTGTCCCTGATAAAGGGTTTGAGGAGGAAAATATTGAACAAATTTTGAGATATGATTATGGAAAATATTATGCATCAAAAACTTTCTTTGATGATGGGAAGAATAGAAGGATTTTGCTTGGATGGGTCAATGAGTCCTCAAGTGTTGCTGATGATATCAAAAAAGGATGGTCTGGAATCCATACAATTCCAAGGACAATTTGGTTACACAAGTCAGGAAAACAGTTGATACAGTGGCCAGTTGTGGAAGTTGAGAAGCTAAGAGTAAATCCTATCAAATGGCCCACCAAAATACTCGAAGGAGGTGAACTGCTTCCAATTAATGGTGTCACAGCAGCACAAGCTGATGTTGAAATTTCATTTGAAGTGAATAATATCAGAGAAGCTGATGTTTTGGAGAATTGGACAGACCCTCAAATTCTGTGTAGCCAAAAGGGCACATCAGTGAAAAGTGGATTGGGACCTTTTGGCCTGCTAGTTTTTGCGTCAAAGGGGTTGCAAGAGTTCACATCAGTGTTCTTTAGAATATTCAAATACCAACAAAAAAATTTGGTGCTCTTTTGTAGTGACCAAAGCAGGTCTTCTTTGAATAAAGATAATGATTTGACCACTTATGGGACTTTTATAGACGTGAATGTTCTTCATGAGAAGCTGTCATTGAGAAGTTTGATTGATCACTCTGTGGTAGAGAGTTTTGGAGGAGAAGGGAAGGCATGCATCACATCAAGAGTTTATCCTACATTGGCCATCAATGATAAAGCACTACTTTATGCTTTCAATAATGGAACTACTAATGTGAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAAGCACAATTAAATGGAAACTTATAA 1737 0.3644 MTIFSTMWLLPLFTFIYVNGILPIEATHHVYRNLQSLSSDDSFKQPYRTAYHFQPPKNWINDPNGPLSYKGLYHLFYQYNPKGAVWGNIVWAHSVSTDLVNWTPLDPAIFPSQPFDINGCWSGSATILHGNKPAILYTGIDPMNHQVQNIAYPKNLSDPFLREWIKSPKNPLMEPTSENKINASSFRDPTSGWLGKDGNWRIIIGSKRNTRGIAILYKSKDFINWIKSKHPLHSAKGTGMWECPDFFPVLKIGTFGVDTSLNSDDVRHVLKVSLDDKKHDYYLIGTYNDDKDKFVPDKGFEEENIEQILRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDIKKGWSGIHTIPRTIWLHKSGKQLIQWPVVEVEKLRVNPIKWPTKILEGGELLPINGVTAAQADVEISFEVNNIREADVLENWTDPQILCSQKGTSVKSGLGPFGLLVFASKGLQEFTSVFFRIFKYQQKNLVLFCSDQSRSSLNKDNDLTTYGTFIDVNVLHEKLSLRSLIDHSVVESFGGEGKACITSRVYPTLAINDKALLYAFNNGTTNVKITRLSAWSMKKAQLNGNL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04254 578 Gene3D Glycosyl hydrolase domain; family 43 56 383 IPR023296 -
Mepo1g04254 578 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 56 385 - -
Mepo1g04254 578 Pfam Glycosyl hydrolases family 32 C terminal 376 568 IPR013189 -
Mepo1g04254 578 SMART glyco_32 52 529 IPR001362 GO:0004553|GO:0005975
Mepo1g04254 578 ProSitePatterns Glycosyl hydrolases family 32 active site. 52 65 IPR018053 GO:0004553|GO:0005975
Mepo1g04254 578 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 39 574 - -
Mepo1g04254 578 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 373 IPR013148 -
Mepo1g04254 578 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 385 569 - -
Mepo1g04254 578 CDD GH32_Fruct1-like 58 362 - -
Mepo1g04254 578 SUPERFAMILY Arabinanase/levansucrase/invertase 43 374 IPR023296 -
Mepo1g04254 578 Gene3D - 384 569 - -
Mepo1g04254 578 SUPERFAMILY Concanavalin A-like lectins/glucanases 373 571 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04254 Mepo-Chr1 49869460 49874177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04254 67 575 Glycoside Hydrolase AT3G13790 66.925 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04254 K01193 - gmx:100776791 964.14