Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04238 ATGGGATCCAACGGCTTGTGTCCTTCAATAAAAAACATTCTTCTTTTAGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCAACAAACAGTTCAAAGTTAGCTTTTGAGAAGTTTGTGTTCACTAAGACTGTTAAGACAAATGCAAGGACAGAAGCTGAGATAACACTGCTTGAGAACAATATCATTGTTTACAAATTTGTGCAAGACTTACATTTCTTTGTCACCGGCGGTGATGATGAAAATGAGCTCATTTTGTCATCTGTTCTTCAAGGTTTCTTTGATGCAGTCACCCTTCTGCTGAGGAGCAATGTTGACAAAAGTGAGGCACTTGAGAACTTGGATCTCATTCTTTTATGTCTTGACGAGATCGTTGATGGAGGGATTATACTTGAAACAAATGGACCTCTTATTGCCGAAAAAGTGACCTCCCATAACATGGATGCTGATGCTCCCTTATCAGAGCAGACACTAACTCAGGCATGGGCTACAGCCAGAGACACTTTCACAAGAACTCTTTTAACATGA 543 0.4088 MGSNGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTKTVKTNARTEAEITLLENNIIVYKFVQDLHFFVTGGDDENELILSSVLQGFFDAVTLLLRSNVDKSEALENLDLILLCLDEIVDGGIILETNGPLIAEKVTSHNMDADAPLSEQTLTQAWATARDTFTRTLLT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04238 180 CDD Zeta-COP 11 146 - -
Mepo1g04238 180 Gene3D - 3 150 - -
Mepo1g04238 180 SUPERFAMILY SNARE-like 10 150 IPR011012 -
Mepo1g04238 180 PANTHER ZETA-COAT PROTEIN 6 179 IPR039652 GO:0006890|GO:0030126
Mepo1g04238 180 FunFam Coatomer subunit zeta-2 4 150 - -
Mepo1g04238 180 Pfam Clathrin adaptor complex small chain 10 151 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04238 Mepo-Chr1 49673341 49676770 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04238 K20472 - gmx:547466 317.39