Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04162 ATGTCGAAATTGAAAGGTGAAGTGGAAAACCCAACATCAGACACAAATTGTCCATATTCATCGGAATTTCAATGTTCTGTTCCTCAAAGTCACAAGCATGATGTCTTTGTTAGTTTTAGAGGTCTAGACATCCGTGAAGGATTTCTTAGTCATTTGGTTGATGCTTTATCTCGAAAGAAAATTGTCTTCTTTATAGACAATAAGCTTATAAAAGGAAATGAAATATCACAATCACTTTTTGAAGCAATTGAAACATCTTCAATTTCATTAGTCATATTCTCTCAAAACTATGCTTCTTCATCATGGTGTTTGGATGAGCTAGTCAAAATTGTTGAGTGTAGAGAGAAAGATGGACAAATTTTATTGCCTGTTTTTTACAAAGTTGACCCTACAATTGTGAGGCATCAGAAGGGGACTTATGCAAATGCATTTGCAGAACATGAACAAAAGTACAATTTGAACAAGGTGAAACAGTGGAGAAGCGCTTTGAAGAAATCTGCAGATATCTCAGGGTTTCATTCATCACAATTTTTGTAA 537 0.3445 MSKLKGEVENPTSDTNCPYSSEFQCSVPQSHKHDVFVSFRGLDIREGFLSHLVDALSRKKIVFFIDNKLIKGNEISQSLFEAIETSSISLVIFSQNYASSSWCLDELVKIVECREKDGQILLPVFYKVDPTIVRHQKGTYANAFAEHEQKYNLNKVKQWRSALKKSADISGFHSSQFL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04162 178 Gene3D - 29 177 IPR035897 -
Mepo1g04162 178 FunFam Disease resistance protein (TIR-NBS-LRR class) 29 177 - -
Mepo1g04162 178 ProSiteProfiles TIR domain profile. 31 178 IPR000157 GO:0007165
Mepo1g04162 178 PANTHER TMV RESISTANCE PROTEIN N-LIKE 29 175 - -
Mepo1g04162 178 SMART till_3 32 169 IPR000157 GO:0007165
Mepo1g04162 178 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 172 IPR035897 -
Mepo1g04162 178 Pfam TIR domain 32 165 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04162 Mepo-Chr1 48364284 48364820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04162 33 172 Miscellaneous Gene Families AT1G57670 42.857 2.00e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04162 - - mtr:11424339 343.584