Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04147 ATGATTTTCATTCTTTTCCTCTTAACTCTTCTCTCACATTCCATAACCAATGCTTCTGTACTAGACTTCTGTGTAGCAGATTTATCTTCTCCACAAACCCCTTCAGGCTACCCTTGCAAAAAATCAGTAACAATCAATGACTTTGTTTACTCCAACTTTAATTCAGGAAACACTTCAACAAATTTTTTCAAATTTTCAATAACTCCTGCATTTGTTAATCAATTTCCAGCTGTTAATGGCCTTGGTTTATCCGCAGCAAAACTGGACTTAGACGTTGGAGGTATAATTCCAATGCATTCACATCGCGGCGCTTCGGAGTTAATGATTGTGGTACAAGGTCGTATAACTGCTGGTTTTATTTCTTCTGATAATACTGTTTTTATCAAGACACTTTCTAAAGGTCAAATTTTGGTTCTTCCACAAGGTTTGTTGCATTTTCAATATAATGCTGGAAGGAATAAAGCTTCTGCTTATCTTACTTTTAGTAGTGAGAACCCTGGTTCACAAGTTCTTGATCTTGCTTTGTTTGGAAATAATTTGAGTTCTGCTAATTTGATAAAGAGTACTTTGCTTGATCCTGCTCAAGTTAAAAAGCTTAAGGCTATTTTTGGTGGGAGTGGCTAG 624 0.3606 MIFILFLLTLLSHSITNASVLDFCVADLSSPQTPSGYPCKKSVTINDFVYSNFNSGNTSTNFFKFSITPAFVNQFPAVNGLGLSAAKLDLDVGGIIPMHSHRGASELMIVVQGRITAGFISSDNTVFIKTLSKGQILVLPQGLLHFQYNAGRNKASAYLTFSSENPGSQVLDLALFGNNLSSANLIKSTLLDPAQVKKLKAIFGGSG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04147 207 SMART Cupin_1_3 51 197 IPR006045 -
Mepo1g04147 207 FunFam Auxin-binding protein ABP19a 17 206 - -
Mepo1g04147 207 Gene3D Jelly Rolls 17 207 IPR014710 -
Mepo1g04147 207 PRINTS Germin signature 129 149 IPR001929 GO:0030145
Mepo1g04147 207 PRINTS Germin signature 162 177 IPR001929 GO:0030145
Mepo1g04147 207 PRINTS Germin signature 99 119 IPR001929 GO:0030145
Mepo1g04147 207 CDD cupin_OxOx 18 203 IPR001929 GO:0030145
Mepo1g04147 207 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 13 200 - -
Mepo1g04147 207 SUPERFAMILY RmlC-like cupins 20 200 IPR011051 -
Mepo1g04147 207 Pfam Cupin 63 195 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04147 Mepo-Chr1 48197512 48198269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04147 17 207 Miscellaneous Gene Families AT1G72610 53.886 1.29e-74 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04147 - - nnu:104600574 241.121