Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04146 ATGAAGATTATTCACATAGTTTTTCTCTTCACTTTTCTTTCATTCACTACTTCCCAAGCTTCTGTCAATGATTTTTGTGTAGCCGATTTAAAGGCTCCAGATACCCCTTCAGGCTATCACTGCAAACCCCTAGCAAATATCACATCAGATGATTTCGTCTTTCATGGCTTCGTAGCCGGAAACACCAACAACTCTTTCAACGCTGCTCTTACCTCCGCATTTGTCACTGATTTTCCAGGCCTTAACGGACTTGGAATCTCCGCAGCGCGGTTAGACATAGCAGAAAACGGATCGATTCCAATGCATACTCATCCCGGTGCTACTGAATTATTGATAATAGTTCAAGGTGAAATAACTGCTGGATTTCTAACAACTACAGCAGTTTATTCGAAGACGTTGAAACCGGGTGATCTTATGGTTTTTCCACAAGGGATGTTGCATTTTCAAGTTAATTCTGGTAAGGGAAAAGCTACTGCTTTTCTTACATTTAGTAGTGCAAATCCTGGTGCTCAATTACTTGATCTTCTTTTGTTTTCCAATAATTTACCTTCTGAATTAGTGGCACAAACTACTTTTCTTGATCTTGCTCAAGTGAAGAAGCTAAAGGCTAGGTTTGGTGGAAGAGGTTAG 630 0.4016 MKIIHIVFLFTFLSFTTSQASVNDFCVADLKAPDTPSGYHCKPLANITSDDFVFHGFVAGNTNNSFNAALTSAFVTDFPGLNGLGISAARLDIAENGSIPMHTHPGATELLIIVQGEITAGFLTTTAVYSKTLKPGDLMVFPQGMLHFQVNSGKGKATAFLTFSSANPGAQLLDLLLFSNNLPSELVAQTTFLDLAQVKKLKARFGGRG 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04146 209 PRINTS Germin signature 131 151 IPR001929 GO:0030145
Mepo1g04146 209 PRINTS Germin signature 102 122 IPR001929 GO:0030145
Mepo1g04146 209 PRINTS Germin signature 164 179 IPR001929 GO:0030145
Mepo1g04146 209 CDD cupin_OxOx 18 205 IPR001929 GO:0030145
Mepo1g04146 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 16 203 - -
Mepo1g04146 209 Gene3D Jelly Rolls 18 208 IPR014710 -
Mepo1g04146 209 ProSitePatterns Germin family signature. 97 110 IPR019780 GO:0030145
Mepo1g04146 209 SMART Cupin_1_3 55 199 IPR006045 -
Mepo1g04146 209 FunFam Auxin-binding protein ABP19a 19 208 - -
Mepo1g04146 209 Pfam Cupin 58 198 IPR006045 -
Mepo1g04146 209 SUPERFAMILY RmlC-like cupins 23 206 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04146 Mepo-Chr1 48180324 48188004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04146 20 209 Miscellaneous Gene Families AT1G72610 60.417 1.68e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04146 - - gmx:100783206 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04146 1 48180324 48188004 Mepo1g04146 1 48180324 48188004 ECH