Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04140 ATGAAGATGATTCAAACTATTCTTTTCTTTTTTGCTCTTATCTCATACACCTCAAATGCTATTGATTCTGATGATTTCTGTGTAGCAGACTTATCGTTTCCAGACACCCCTTCGGGCTATCCATGCAAGTCGGAAAACAATGTAACAGCTGATGATTTTGTGTTCTCTGGCTTGAATATAGCTGCAAACACGTCGACAAACTCTTTTAAAGTTGCATTTACCCCTGTAAAAGTCGATAAGATACCAGGTCTCAATGGACTTGGTATCTCTGTAGCAAGAATAGATCTTGGCTTCAATGGAAGTGTACCAATGCACACTCATCCTGGTGTAGGCGAATTTATAATCGTCATTCAAGGTCAAATGACTGCTGGATTTATCACACCTACAAAAGTTTTTATGAAAACTCTTAATCCTGGTGATGTTTGGGTTTTTCCAACAGGACTTTTGCATTTTATACTTAACGCTGGTCCTGGAAATGCTGTTGCTTATTCTGCATATACTAGCTCAAATTTTGCCACTCATTTAACTGATTTTTTGTTATTTGGTAACAGCTTACCAACTCCCACAGTTCAAAAGACTACTCTTCTTGATCCTCCACAAATTATCAAGCTTAAGGCTAATTTTGGTGGCAGTGGCTAG 639 0.3818 MKMIQTILFFFALISYTSNAIDSDDFCVADLSFPDTPSGYPCKSENNVTADDFVFSGLNIAANTSTNSFKVAFTPVKVDKIPGLNGLGISVARIDLGFNGSVPMHTHPGVGEFIIVIQGQMTAGFITPTKVFMKTLNPGDVWVFPTGLLHFILNAGPGNAVAYSAYTSSNFATHLTDFLLFGNSLPTPTVQKTTLLDPPQIIKLKANFGGSG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04140 212 PRINTS Germin signature 167 182 IPR001929 GO:0030145
Mepo1g04140 212 PRINTS Germin signature 105 125 IPR001929 GO:0030145
Mepo1g04140 212 PRINTS Germin signature 134 154 IPR001929 GO:0030145
Mepo1g04140 212 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 17 198 - -
Mepo1g04140 212 SUPERFAMILY RmlC-like cupins 25 208 IPR011051 -
Mepo1g04140 212 SMART Cupin_1_3 58 202 IPR006045 -
Mepo1g04140 212 CDD cupin_OxOx 24 208 IPR001929 GO:0030145
Mepo1g04140 212 Gene3D Jelly Rolls 21 212 IPR014710 -
Mepo1g04140 212 FunFam Auxin-binding protein ABP19a 20 211 - -
Mepo1g04140 212 Pfam Cupin 61 200 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04140 Mepo-Chr1 48118609 48119455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04140 1 211 Miscellaneous Gene Families AT5G20630 50.000 1.05e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04140 - - gmx:100818105 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04140 1 48118609 48119455 Mepo1g04140 1 48118609 48119455 ECH