Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04128 ATGGCGGTTTCAACTATAGCGTTATACGCGAGTCCACCGAGTAGTGTGTGTTCTACACCGCATCAGATTAACTATGATTTCGAATTAGGATCTAGATCTTCGTCACCGGCGTCGACGGCGACGGCAGCGTCCACGTCGGGGAAATCGGTGATGGGTGGTTTATCGTGTTTGTTTTCGTCTCCGACGGTGGTGAAGCAGCATGTTCCTTTTACTTCGAGTTTTTCCGGTGGTGGTGGTGGTGATGAAGATGAATTGAAGGAGCTGAGTAGTTCGTTTTCGTATTCATTTTCACCGACGAAGTTTGGTGGATCTTGGAAGAGAGATCATAGTCCAGTTTCGGTTTTTCAGTGTCCTGTTTCGTGTAGTAGTAGCATCGGTGCCGGAACGGTTCGATCGGGGAGGGGAAGTACTGGTGGTGGGTTTTTTGATGGGTTTGTGAGAAGTGCTTTGGGTTCTTCTTGTTTGGATTATGATTCTACTGGTCTTAGATTACGCGGTGGTGGTGATGGTGATTCTGGAATTGTTGATGAGTTGACTTTTAATTTGGATGATACTTTTGTGGAGGGTTGTGTTGGAATTGAGATTGAGCCTTATGCTAAGAAGTTGTTGATGAATGCTCAGTTAAGACATAAGATCTTTTGTGAAGAGTTTGTTATTAAGGCCTTTTGTGAAGCTGAGAAAGCTCATAGAGGACAGATGCGAGCGAGTGGCGATCCGTATTTGCAGCATTGTTTGGAAACTGCTGTGTTGTTGGCTTTGGTCGGTGCGAATTCAACTGTAGTTGCTGCAGGGCTTTTGCATGATACACTTGATGATGCATTTCTTACTTATGATTATATATACGGGATGTTTGGAGCTGGTGTTGCTGATTTAGTTGAAGGGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGTGACAATAATACAGCTAGCAAATCTGTTGAAGCTGACCGCCTGCATACAATGTTCCTTGCCATGGCAGATGCAAGAGCTGTCCTCATTAAATTGGCTGATCGATTACATAATATGATGACACTAGATGCATTACCGGTTGCCAAGCAGCAGAGGTTTGCAAAGGAAACTTTGGAGATTTTTGCACCTTTGGCCAACCGTTTAGGAATAGCTAATTGGAAGGAACAATTAGAAAATTTATGTTTTAAGCATCTCAACCCTGTACAGCACAAAGAGCTTTCGTCAAAGCTTGTGGAATCGTATGATGACGCAATGATTGCTTCTGCAATAGAAAGATTAGAGCAAGCACTCAAAGATGAAGGCATTTCTTATCATGTCATTTCTGGACGGCACAAGAGCTTGTATAGCGTTTATTGCAAAATATTGAAGAAAAAACTGACCATTGATGATATCCATGACATTTATGGGCTGCGCGTGATTGTTGAGAAGGAGGAAGACTGTTACAAAGCCTTAAAAGTTGTTCACCGGTTATGGTCTGAAGTGCATGGAAAACTGAAAGATTACATACGTTGCCCCAAGTTCAATGGTTATCAATCTCTGCACACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAGTTCGAACAAAAGATATGCATTTGCAAGCAGAATTTGGATTCGCTGCTCATTGGAGGTACAAGGAAGATCATTGTCAGCTTTCTTCATATGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACTTGGCAGTGCGAAGCAATGAGTAAAGATTCCACTTCTGTTGGATTTGTTGATTCAATCAAGCCACCTTGCAAGTTCCCTTCTCATGCTGATAACTGTCCATATTCTTACAAGCCTGATTGCGGGCAGGATGGACCTGTGTTTGTTATCATGATTGAGAATGACAAGATGTCTGTCCAAGAATTTTGTGCAAACTCAACAGTACTAGATTTGTTGGAGAGGGTCGGACGAGCAAGCTGTAGGTTGACAACATATAGGTTCCCTCTGAAGGAAGAATTGAGGCCAAGACTGAATCACAAACCTGTAAGTGATCCAAATTGCAAGTTGAGGATGGGAGATGTGATTGAACTTACACCAGCCATACCTGATAAGTATCTGACCGAATATAGGGAAGAAATTCAGCGAATGTATGATCGCGGGCTAACTGTATCAAGCATGGGAACTACTGCTACTGCAAGCAGCATGGTTGGCACTAGTTGA 2166 0.4331 MAVSTIALYASPPSSVCSTPHQINYDFELGSRSSSPASTATAASTSGKSVMGGLSCLFSSPTVVKQHVPFTSSFSGGGGGDEDELKELSSSFSYSFSPTKFGGSWKRDHSPVSVFQCPVSCSSSIGAGTVRSGRGSTGGGFFDGFVRSALGSSCLDYDSTGLRLRGGGDGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALVGANSTVVAAGLLHDTLDDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKEQLENLCFKHLNPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLTIDDIHDIYGLRVIVEKEEDCYKALKVVHRLWSEVHGKLKDYIRCPKFNGYQSLHTVVMGEGKVPLEVQVRTKDMHLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGFVDSIKPPCKFPSHADNCPYSYKPDCGQDGPVFVIMIENDKMSVQEFCANSTVLDLLERVGRASCRLTTYRFPLKEELRPRLNHKPVSDPNCKLRMGDVIELTPAIPDKYLTEYREEIQRMYDRGLTVSSMGTTATASSMVGTS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04128 721 FunFam GTP pyrophosphokinase RelA 201 391 - -
Mepo1g04128 721 SMART hd_13 236 353 IPR003607 -
Mepo1g04128 721 Gene3D Beta Polymerase, domain 2 394 524 IPR043519 -
Mepo1g04128 721 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 100 686 - -
Mepo1g04128 721 SMART RelA_SpoT_2 434 544 IPR007685 GO:0015969
Mepo1g04128 721 Gene3D Hypothetical protein af1432 197 391 - -
Mepo1g04128 721 CDD NT_Rel-Spo_like 414 532 IPR007685 GO:0015969
Mepo1g04128 721 ProSiteProfiles S4 RNA-binding domain profile. 658 695 - -
Mepo1g04128 721 FunFam GTP pyrophosphokinase RelA 392 524 - -
Mepo1g04128 721 CDD HDc 238 366 IPR003607 -
Mepo1g04128 721 SUPERFAMILY HD-domain/PDEase-like 200 391 - -
Mepo1g04128 721 Pfam HD domain 225 375 - -
Mepo1g04128 721 ProSiteProfiles HD domain profile. 240 344 IPR006674 -
Mepo1g04128 721 SUPERFAMILY Nucleotidyltransferase 381 570 IPR043519 -
Mepo1g04128 721 Pfam Region found in RelA / SpoT proteins 434 543 IPR007685 GO:0015969
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04128 Mepo-Chr1 48060843 48064912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04128 235 541 EF-hand Containing Proteins AT3G17470 30.606 3.69e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04128 K00951 - gmx:100787301 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04128 1 48060843 48064912 Mepo1g04128 1 48060843 48064912 ECH