Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04043 ATGGCGGAGAAAGCATGCATCAAGCGCCTTCAGAAGGAGTATAGAGCACTTTGTAAAGAGCCAGTTTCCCATATTGTGGCCCGTCCTTCACCAAGTGATATTCTTGAGTGGCATTACGTATTGGAAGGAAGTGAGGGAACACCTTTCTCAGGTGGATATTACTATGGAAAAATCAAGTTTCCTCAGGAATATCCTTATAAACCTCCTGGAATCAGCATGACAACACCTAATGGGCGGTTCATGACACAGAAAAAGATTTGTTTATCAATGAGCGATTTTCATCCTGAAAGTTGGAATCCAATGTGGTCTGTATCAAGCATACTTACCGGGCTTCTTTCATTCATGATGGACACCAGCCCAACCACTGGCAGTGTAAACACTACTACTGTCGAGAAGCAGCGTCTAGCAAAATCTTCAATGTCTTTCAATTGTAAGAATGCAACATTCAGGAAGATGTTCCCTGAGTACGTGGAGAAGTACAACAAGCAGCAGCTTTCTGAGCAAGTTACTTCTGAGCAGCCAGCGTCGTCAGAGACTGGTCAAGATAAAAGTCCAAGGTCTGTTTTGGAAAACAATGTAGAGTCCACAGGAGAAGACATGAAAAGGGTTGAGGGATTGAAGGATGTGAGGAGAAACAGAAAACAAGGATTTCCAACTTGGATGATGTTATTACTCTTCTCCATCTTTGGGGTTGTTATGGCATTACCTCTACTCCAGTTGTGA 723 0.4302 MAEKACIKRLQKEYRALCKEPVSHIVARPSPSDILEWHYVLEGSEGTPFSGGYYYGKIKFPQEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTVEKQRLAKSSMSFNCKNATFRKMFPEYVEKYNKQQLSEQVTSEQPASSETGQDKSPRSVLENNVESTGEDMKRVEGLKDVRRNRKQGFPTWMMLLLFSIFGVVMALPLLQL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04043 240 MobiDBLite consensus disorder prediction 164 194 - -
Mepo1g04043 240 SMART ubc_7 8 162 - -
Mepo1g04043 240 MobiDBLite consensus disorder prediction 164 207 - -
Mepo1g04043 240 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Mepo1g04043 240 Pfam Ubiquitin-conjugating enzyme 9 124 IPR000608 -
Mepo1g04043 240 CDD UBCc 7 157 IPR000608 -
Mepo1g04043 240 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Mepo1g04043 240 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 7 163 - -
Mepo1g04043 240 FunFam Ubiquitin-conjugating enzyme E2 34 1 177 - -
Mepo1g04043 240 SUPERFAMILY UBC-like 6 158 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04043 Mepo-Chr1 46986324 46991021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04043 1 240 Miscellaneous Gene Families AT1G17280 76.667 2.91e-139 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04043 K04554 - gmx:100778181 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04043 1 46986324 46991021 Mepo1g04043 1 46986324 46991021 ECH